RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 CIR1Q86X95 450 aaPredicted RBP18.79■□□□□ 0.6
SNX11-201ENST00000359238 FNDC8Q8TC99 324 aa18.79■□□□□ 0.6
SNX11-201ENST00000359238 TRIM62Q9BVG3 475 aa18.79■□□□□ 0.6
SNX11-201ENST00000359238 SLC39A8Q9C0K1 460 aa18.79■□□□□ 0.6
SNX11-201ENST00000359238 POMPQ9Y244 141 aa18.79■□□□□ 0.6
SNX11-201ENST00000359238 UNC80Q8N2C7 3258 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 LAG3P18627 525 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 SLC5A2P31639 672 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 PHEXP78562 749 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 ALFQ53S48 1182 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 TFAP2DQ7Z6R9 452 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 KBTBD6Q86V97 674 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 NUDCD3Q8IVD9 361 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 C7orf61Q8IZ16 206 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 CEP70Q8NHQ1 597 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 SNRNP27Q8WVK2 155 aaKnown RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 DCUN1D1Q96GG9 259 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 NOL6Q9H6R4 1146 aaKnown RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 ZNF395Q9H8N7 513 aaPredicted RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 MKS1Q9NXB0 559 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 SPG21Q9NZD8 308 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 MARCOQ9UEW3 520 aaPredicted RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 ZC3H7BQ9UGR2 993 aaKnown RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 BACE2Q9Y5Z0 518 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 MYLKQ15746 1914 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 SPAG6O75602 509 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 CSPG5O95196 566 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 FGBP02675 491 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 TPSB2P20231 275 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 PCSK6P29122 969 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 SESN2P58004 480 aaPredicted RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 CREB5Q02930 508 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 FPGSQ05932 587 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 APOFQ13790 326 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 TPSAB1Q15661 275 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 BRMS1LQ5PSV4 323 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 RABGAP1LQ5R372 815 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 KLHL35Q6PF15 583 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 OTOP3Q7RTS5 596 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 ZNF683Q8IZ20 524 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 MCUQ8NE86 351 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 ARNTL2Q8WYA1 636 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 HDAC11Q96DB2 347 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 APOL2Q9BQE5 337 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 EBF4Q9BQW3 602 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 MLPHQ9BV36 600 aaPredicted RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 FAIMQ9NVQ4 179 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 C6orf203Q9P0P8 240 aaPredicted RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 KLHL8Q9P2G9 620 aaPredicted RBP18.78■□□□□ 0.6
SNX11-201ENST00000359238 XIRP2A4UGR9 3374 aa18.78■□□□□ 0.6
SNX11-201ENST00000359238 TRIM49D1C9J1S8 452 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 PDE5AO76074 875 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 JCHAINP01591 159 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 KCNQ1P51787 676 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 SMARCB1Q12824 385 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 TUBB3Q13509 450 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 PPP2R5DQ14738 602 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 MS4A13Q5J8X5 152 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 MSANTD2Q6P1R3 559 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 CES3Q6UWW8 571 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 SLC26A11Q86WA9 606 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 IGSF8Q969P0 613 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 SERPINB11Q96P15 392 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 OXCT2Q9BYC2 517 aaPredicted RBP18.77■□□□□ 0.6
SNX11-201ENST00000359238 STN1Q9H668 368 aaKnown RBP18.77■□□□□ 0.6
SNX11-201ENST00000359238 TLR6Q9Y2C9 796 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 SZT2Q5T011 3432 aa18.77■□□□□ 0.6
SNX11-201ENST00000359238 SLC38A8A6NNN8 435 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 E9PBE3 544 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 GJB5O95377 273 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 NFKB1P19838 968 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 MGAT1P26572 445 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 HOXC13P31276 330 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 NR1H2P55055 460 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 MLLT6P55198 1093 aaPredicted RBP18.77■□□□□ 0.59
SNX11-201ENST00000359238 TBX4P57082 545 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 C10orf120Q5SQS8 335 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 CROCCP3Q8IVE0 287 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 BBS5Q8N3I7 341 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.59
SNX11-201ENST00000359238 ZBED2Q9BTP6 218 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 PADI4Q9UM07 663 aa18.77■□□□□ 0.59
SNX11-201ENST00000359238 CCDC195A0A1B0GUA6 201 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 MAGEB3O15480 346 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 SORBS2O94875 1100 aaKnown RBP18.76■□□□□ 0.59
SNX11-201ENST00000359238 SNRPAP09012 282 aaKnown RBP18.76■□□□□ 0.59
SNX11-201ENST00000359238 IDO1P14902 403 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 CA8P35219 290 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 PPIGQ13427 754 aaKnown RBP eCLIP18.76■□□□□ 0.596e-7■■■■■ 27
SNX11-201ENST00000359238 SLC44A4Q53GD3 710 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 TRIM67Q6ZTA4 783 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 OR52K1Q8NGK4 314 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 SPATA17Q96L03 361 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 AK5Q9Y6K8 562 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 DOCK6Q96HP0 2047 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 ANAPC1Q9H1A4 1944 aa18.76■□□□□ 0.59
SNX11-201ENST00000359238 BIRC5O15392 142 aa18.75■□□□□ 0.59
SNX11-201ENST00000359238 SUPT3HO75486 399 aa18.75■□□□□ 0.59
SNX11-201ENST00000359238 KRT37O76014 449 aa18.75■□□□□ 0.59
SNX11-201ENST00000359238 CRTAMO95727 393 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms