RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CNBD2Q96M20 576 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 MRPL40Q9NQ50 206 aaKnown RBP11.27□□□□□ -0.6
SSU72-202ENST00000359060 ANLNQ9NQW6 1124 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 OLA1Q9NTK5 396 aaKnown RBP11.27□□□□□ -0.6
SSU72-202ENST00000359060 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 HAS3O00219 553 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 PRKCGP05129 697 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 FAM163BP0C2L3 166 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 MLLT6P55198 1093 aaPredicted RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 CDK18Q07002 472 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 PPM1LQ5SGD2 360 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 RASAL3Q86YV0 1011 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 LRRC49Q8IUZ0 686 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 SLC22A9Q8IVM8 553 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 PTGR2Q8N8N7 351 aaPredicted RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 RDH11Q8TC12 318 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 BTN2A3PQ96KV6 586 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 TMEM30AQ9NV96 361 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 OXSMQ9NWU1 459 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 MKS1Q9NXB0 559 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 TRMT6Q9UJA5 497 aaKnown RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 SNX13Q9Y5W8 968 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 ZCWPW2A0A1B0GU75 182 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 MGEA5O60502 916 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 CRTAMO95727 393 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 RHOQP17081 205 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 SCAPQ12770 1279 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 TSTA3Q13630 321 aaPredicted RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 HNRNPDQ14103 355 aaKnown RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 HECTD2Q5U5R9 776 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 GLT6D1Q7Z4J2 308 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 BHLHE22Q8NFJ8 381 aaPredicted RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 OR6Y1Q8NGX8 325 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 CCDC97Q96F63 343 aaPredicted RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 PANX3Q96QZ0 392 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 BPIFA1Q9NP55 256 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 HACD3Q9P035 362 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
SSU72-202ENST00000359060 VPS28Q9UK41 221 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 EMCNQ9ULC0 261 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 PPM1HQ9ULR3 514 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
SSU72-202ENST00000359060 PSMD12O00232 456 aaPredicted RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 DLX3O60479 287 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ITGB6P18564 788 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ATP5C1P36542 298 aaKnown RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 SP3Q02447 781 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 RAD51Q06609 339 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 PTRHD1Q6GMV3 140 aaKnown RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 IYDQ6PHW0 289 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 GK5Q6ZS86 529 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 CYS1Q717R9 158 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 TRIML2Q8N7C3 387 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ACVR1CQ8NER5 493 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 OR7D4Q8NG98 312 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 UCMAQ8WVF2 138 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 SEPT8Q92599 483 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ASIC4Q96FT7 647 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 GPR22Q99680 433 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 LATS2Q9NRM7 1088 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 H7C4K7 107 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 MRASO14807 208 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 SNNO75324 88 aaPredicted RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 MAGEA3P43357 314 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 PSEN1P49768 467 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ACTR3P61158 418 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 LBRQ14739 615 aaKnown RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 FUT11Q495W5 492 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 CLEC6AQ6EIG7 209 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 FAM156AQ8NDB6 213 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 PPP2R3CQ969Q6 453 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 APOL5Q9BWW9 433 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 S100A14Q9HCY8 104 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 SEMA4BQ9NPR2 832 aaPredicted RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 CATSPERZQ9NTU4 200 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ZDHHC2Q9UIJ5 367 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 USP3Q9Y6I4 520 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 MBL2P11226 248 aaPredicted RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 HOXD8P13378 290 aaPredicted RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 RPL17P18621 184 aaKnown RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 CCL23P55773 120 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 CDH18Q13634 790 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 TSTD2Q5T7W7 516 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 SCIMPQ6UWF3 145 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 DSELQ8IZU8 1212 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 FBXW8Q8N3Y1 598 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 TRPC4APQ8TEL6 797 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 DNAJC1Q96KC8 554 aaKnown RBP11.26□□□□□ -0.61
SSU72-202ENST00000359060 ECSITQ9BQ95 431 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 SEPT3Q9UH03 358 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 POMPQ9Y244 141 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 KCTD3Q9Y597 815 aa11.26□□□□□ -0.61
SSU72-202ENST00000359060 PSME4Q14997 1843 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms