RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SNX30Q5VWJ9 437 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 CES4AQ5XG92 561 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF276Q8N554 614 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 MAGEB18Q96M61 343 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 CERS4Q9HA82 394 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 CLEC4EQ9ULY5 219 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 AAR2Q9Y312 384 aaKnown RBP12.77□□□□□ -0.37
GGPS1-202ENST00000358966 PER2O15055 1255 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 MYL4P12829 197 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 BGNP21810 368 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 MZF1P28698 734 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 SERPINB4P48594 390 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 RENBPP51606 427 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 NEK3P51956 506 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 NCALDP61601 193 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 MPP1Q00013 466 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 MGAT5Q09328 741 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 KDELC1Q6UW63 502 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ZCCHC23Q6ZST2 131 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 TPGS1Q6ZTW0 290 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 LDB1Q86U70 411 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ARRDC2Q8TBH0 407 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 TCEAL4Q96EI5 215 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 IMP4Q96G21 291 aaKnown RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 IL22Q9GZX6 179 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ACSS2Q9NR19 701 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 NKX1-2Q9UD57 310 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 CCL26Q9Y258 94 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ERI2A8K979 691 aaKnown RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 EIF3FO00303 357 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 NDUFB5O43674 189 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 DNAJC6O75061 913 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ANXA9O76027 345 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 USP1O94782 785 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 PPM1AP35813 382 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ETV4P43268 484 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 CLCN2P51788 898 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 HTRA4P83105 476 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 SLC18A2Q05940 514 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 CBLBQ13191 982 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF460Q14592 562 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ANO4Q32M45 955 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 TEDDM1Q5T9Z0 273 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 RANBP10Q6VN20 620 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 MARK2Q7KZI7 788 aaKnown RBP12.76□□□□□ -0.37
GGPS1-202ENST00000358966 CCNJLQ8IV13 435 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 RIN3Q8TB24 985 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 CDKL2Q92772 493 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 MUC3BQ9H195 1237 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 TXNDC16Q9P2K2 825 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF180Q9UJW8 692 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 SOX13Q9UN79 622 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
GGPS1-202ENST00000358966 OR51F1A6NGY5 319 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PRAMEF11O60813 436 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 TBL1XO60907 577 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 C1RP00736 705 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 GNAZP19086 355 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 AVPR1AP37288 418 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 TMPRSS15P98073 1019 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 IRF9Q00978 393 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PDE1BQ01064 536 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF33AQ06730 810 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PDE1CQ14123 709 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF235Q14590 738 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 MAP7D1Q3KQU3 841 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SMUG1Q53HV7 270 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SPANXN3Q5MJ09 141 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 CXorf57Q6NSI4 855 aaKnown RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 HERC6Q8IVU3 1022 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 LZICQ8WZA0 190 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 TRMT2BQ96GJ1 504 aaKnown RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PITPNM3Q9BZ71 974 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 MCOLN1Q9GZU1 580 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SLC25A51Q9H1U9 297 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PDFQ9HBH1 243 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ATP13A1Q9HD20 1204 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 INIPQ9NRY2 104 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ABCF3Q9NUQ8 709 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 COMMD8Q9NX08 183 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SCOCQ9UIL1 159 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 MTO1Q9Y2Z2 717 aaKnown RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 MTF2Q9Y483 593 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 INSL6Q9Y581 213 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 FAM237BA0A1B0GVD1 139 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SNX3O60493 162 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 LRG1P02750 347 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 RHOCP08134 193 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 GEMP55040 296 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 NTHL1P78549 312 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PDK4Q16654 411 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PARP15Q460N3 678 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 RNF219Q5W0B1 726 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms