RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EMC10Q5UCC4 262 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 DEFB123Q8N688 67 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 FAM76AQ8TAV0 307 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 FRS2Q8WU20 508 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 CYTH2Q99418 400 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 BRD9Q9H8M2 597 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 CHRAC1Q9NRG0 131 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 SAMD15Q9P1V8 674 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 BCCIPQ9P287 314 aaKnown RBP eCLIP18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 SOX13Q9UN79 622 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 MYO10Q9HD67 2058 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 TTC34A8MYJ7 566 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 GSRP00390 522 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 ASLP04424 464 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 HLA-DPA1P20036 260 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 GCAP28676 217 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 SOX9P48436 509 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 VASPP50552 380 aaPredicted RBP18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 CRYMQ14894 314 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 ACCSLQ4AC99 568 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 TRMT10BQ6PF06 316 aaKnown RBP18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 Q6ZVU0 165 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 TMEM135Q86UB9 458 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 UNC5BQ8IZJ1 945 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 PCDH20Q8N6Y1 951 aaKnown RBP18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 TERB1Q8NA31 727 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 GSDMBQ8TAX9 411 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 ZNF778Q96MU6 729 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 KIFC1Q9BW19 673 aa18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 NOVA2Q9UNW9 492 aaKnown RBP18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 ARIH1Q9Y4X5 557 aaPredicted RBP18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 TCF20Q9UGU0 1960 aaKnown RBP18.3■□□□□ 0.52
SMARCD3-202ENST00000356800 FAM237BA0A1B0GVD1 139 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 MAGEB16A2A368 324 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 FZD6O60353 706 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 PIGNO95427 931 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 FGF1P05230 155 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 ATP5BP06576 529 aaKnown RBP18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 SRPRAP08240 638 aaKnown RBP18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 PRKCHP24723 683 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 EIF2DP41214 584 aaKnown RBP18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 SNRPD1P62314 119 aaKnown RBP18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 CARD16Q5EG05 197 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 PCID2Q5JVF3 399 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 CAMK1DQ8IU85 385 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 HLA-CQ95604 372 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 DHRS4Q9BTZ2 278 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 RPS6KL1Q9Y6S9 549 aa18.29■□□□□ 0.52
SMARCD3-202ENST00000356800 ZCWPW2A0A1B0GU75 182 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 ANTXRLA6NF34 631 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 TRAFD1O14545 582 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 PRKCGP05129 697 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 NMBRP28336 390 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 ATP5DP30049 168 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 MYLK3Q32MK0 819 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 ANKRD20A4Q4UJ75 823 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 PKN3Q6P5Z2 889 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 DPY19L3Q6ZPD9 716 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 OR2A12Q8NGT7 310 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 ZNF669Q96BR6 464 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 MFSD3Q96ES6 412 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 SMIM14Q96QK8 99 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 PHF7Q9BWX1 381 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 MTG2Q9H4K7 406 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 FBRSL1Q9HCM7 1045 aaKnown RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 SMYD2Q9NRG4 433 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 MOCS1Q9NZB8 636 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 LIMD1Q9UGP4 676 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 TCAF1Q9Y4C2 921 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 CCDC78A2IDD5 438 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 HTRA2O43464 458 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 BNIP3LO60238 219 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 USP1O94782 785 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 ALDH1A2O94788 518 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 POLBP06746 335 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 MAPK8P45983 427 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 CCNHP51946 323 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 MAGOHP61326 146 aaKnown RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 EIF4HQ15056 248 aaKnown RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 SMAD2Q15796 467 aaKnown RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 KBTBD12Q3ZCT8 623 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 SPANXN3Q5MJ09 141 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 ARMC3Q5W041 872 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 RYBPQ8N488 228 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 CHST14Q8NCH0 376 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 LPCAT1Q8NF37 534 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 RANBP9Q96S59 729 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 KCNK12Q9HB15 430 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 PRKAG3Q9UGI9 489 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 HCN2Q9UL51 889 aa18.28■□□□□ 0.52
SMARCD3-202ENST00000356800 BPTFQ12830 3046 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 CXorf49A8MYA2 514 aaPredicted RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 POC1B-GALNT4F8VUJ3 575 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 TIMM44O43615 452 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 KAT7O95251 611 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PGLSO95336 258 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PIRTP0C851 137 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 ALADP13716 330 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms