RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 CPA6Q8N4T0 437 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 OR2AP1Q8NGE2 309 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 OR6K2Q8NGY2 324 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 PDCD6IPQ8WUM4 868 aaKnown RBP13.74□□□□□ -0.21
HOXA1-202ENST00000355633 FGF14Q92915 247 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 RMDN1Q96DB5 314 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 NECTIN4Q96NY8 510 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 GAS2L1Q99501 681 aaPredicted RBP13.74□□□□□ -0.21
HOXA1-202ENST00000355633 ADGRE3Q9BY15 652 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 CEP44Q9C0F1 390 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 SLC27A6Q9Y2P4 619 aa13.74□□□□□ -0.21
HOXA1-202ENST00000355633 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 PRLP01236 227 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 PDHA1P08559 390 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 ERVK-10P10266 1014 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 PAMP19021 973 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 MLLT1Q03111 559 aaPredicted RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 NAB1Q13506 487 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 RUNX3Q13761 415 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 MARK2Q7KZI7 788 aaKnown RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 EXOC3L1Q86VI1 746 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 RYBPQ8N488 228 aaPredicted RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 PCDH20Q8N6Y1 951 aaKnown RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 LPCAT1Q8NF37 534 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 BLOC1S5Q8TDH9 187 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 FAM161BQ96MY7 647 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 CIPCQ9C0C6 399 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 C20orf96Q9NUD7 363 aaPredicted RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 ZFATQ9P243 1243 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 DEC1Q9P2X7 70 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 ZNF180Q9UJW8 692 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 ERVW-1Q9UQF0 538 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 REV3LO60673 3130 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 IQANK1A0A1B0GTG1 560 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 UGT1A9O60656 530 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 FAM155BO75949 473 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 NNMTP40261 264 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 PPP2R2AP63151 447 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 BCL2L1Q07817 233 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 DLG2Q15700 870 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 SMAD1Q15797 465 aaKnown RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 TSTD2Q5T7W7 516 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 GRAMD4Q6IC98 578 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 ESRP1Q6NXG1 681 aaKnown RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 KCNMB4Q86W47 210 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 SRRM1Q8IYB3 904 aaKnown RBP13.73□□□□□ -0.21
HOXA1-202ENST00000355633 ARFGAP2Q8N6H7 521 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 UGT1A7Q9HAW7 530 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 UGT1A10Q9HAW8 530 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 UGT1A8Q9HAW9 530 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 TREX1Q9NSU2 369 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 CD207Q9UJ71 328 aa13.73□□□□□ -0.21
HOXA1-202ENST00000355633 FOXO6A8MYZ6 492 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 BNIP3LO60238 219 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 ECI2O75521 394 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 PAPSS2O95340 614 aaPredicted RBP13.72□□□□□ -0.21
HOXA1-202ENST00000355633 GSRP00390 522 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 ASLP04424 464 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 PRKCGP05129 697 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 ATP5BP06576 529 aaKnown RBP13.72□□□□□ -0.21
HOXA1-202ENST00000355633 PIRTP0C851 137 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 SLC6A11P48066 632 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 LAMB3Q13751 1172 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 CNGA3Q16281 694 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 ARMC12Q5T9G4 340 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 LGSNQ5TDP6 509 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 PDPK2PQ6A1A2 396 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 KDM7AQ6ZMT4 941 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 NLRP9Q7RTR0 991 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 TRABD2AQ86V40 505 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 CYB5D2Q8WUJ1 264 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 SORCS1Q8WY21 1168 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 MYLIPQ8WY64 445 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 ATP13A3Q9H7F0 1226 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
HOXA1-202ENST00000355633 SLC17A6Q9P2U8 582 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 SLC2A6Q9UGQ3 507 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
HOXA1-202ENST00000355633 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
HOXA1-202ENST00000355633 MROH6A6NGR9 719 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 ANKRD66B4E2M5 251 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 FZD6O60353 706 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 SOCS5O75159 536 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 PIGNO95427 931 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 DLDP09622 509 aaKnown RBP13.71□□□□□ -0.21
HOXA1-202ENST00000355633 GDI1P31150 447 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 GKP32189 559 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 SERPINB9P50453 376 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 ATP1A2P50993 1020 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 HSP90AA5PQ58FG0 334 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 CARD16Q5EG05 197 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 KIAA0930Q6ICG6 404 aaPredicted RBP13.71□□□□□ -0.21
HOXA1-202ENST00000355633 CAMK1DQ8IU85 385 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 TTC8Q8TAM2 541 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 SUSD6Q92537 303 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms