RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 MAGP20916 626 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ACADVLP49748 655 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 IST1P53990 364 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 TUBA1BP68363 451 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 STARD3Q14849 445 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 GPRIN3Q6ZVF9 776 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 TUBA1AQ71U36 451 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SYTL5Q8TDW5 730 aaPredicted RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ITCHQ96J02 903 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 MED28Q9H204 178 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 MDM4O15151 490 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 RPL3P39023 403 aaKnown RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 TUBP50607 506 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 EFEMP1Q12805 493 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 GNA13Q14344 377 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 PTCHD4Q6ZW05 846 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 TMEM159Q96B96 161 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 GSDMCQ9BYG8 508 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 UNC93B1Q9H1C4 597 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 GRIN2DO15399 1336 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC12A8A0AV02 714 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ITGB6P18564 788 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 PPIBP23284 216 aaKnown RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 CLCN3P51790 818 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 RHAGQ02094 409 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 KCTD8Q6ZWB6 473 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 NODALQ96S42 347 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 VPS28Q9UK41 221 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 PCDHGA3Q9Y5H0 932 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 CASKO14936 926 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 DYRK3O43781 588 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 PGK1P00558 417 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 MTHFRP42898 656 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 SPIBQ01892 262 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 LAMTOR4Q0VGL1 99 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 GK5Q6ZS86 529 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 YAF2Q8IY57 180 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 CDYL2Q8N8U2 506 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ANKRD52Q8NB46 1076 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 OR2T12Q8NG77 320 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 USP7Q93009 1102 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 CD101Q93033 1021 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 CDK5RAP1Q96SZ6 601 aaKnown RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 RACGAP1Q9H0H5 632 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 LYVE1Q9Y5Y7 322 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 DNAJA2O60884 412 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 CCNFP41002 786 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 FAM43BQ6ZT52 329 aaPredicted RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 CBR4Q8N4T8 237 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 QRFPRQ96P65 431 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 BBS4Q96RK4 519 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TTYH1Q9H313 450 aaPredicted RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC9A8Q9Y2E8 581 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TMED5Q9Y3A6 229 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 WASF2Q9Y6W5 498 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 KPNA5O15131 536 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 B3GAT3O94766 335 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ANGPTL1O95841 491 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 HNF4AP41235 474 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 SKIV2LQ15477 1246 aaKnown RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZNF438Q7Z4V0 828 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 STX12Q86Y82 276 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 SPPL2CQ8IUH8 684 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 DNAJC19Q96DA6 116 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 OMDQ99983 421 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TRAF6Q9Y4K3 522 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ULK1O75385 1050 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ANXA5P08758 320 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 COL6A2P12110 1019 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 MSX2P35548 267 aaPredicted RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TIE1P35590 1138 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 HNMTP50135 292 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 CRY1Q16526 586 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 RBM20Q5T481 1227 aaKnown RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 C1orf186Q6ZWK4 172 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ATXN3LQ9H3M9 355 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 PXMP2Q9NR77 195 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ADGRE2Q9UHX3 823 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 EFR3BQ9Y2G0 817 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TDRKHQ9Y2W6 561 aaKnown RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TSPAN4O14817 238 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZBTB14O43829 449 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 RNASEH1O60930 286 aaKnown RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TYMPP19971 482 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 IGFBP5P24593 272 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 PSMA1P25786 263 aaKnown RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ATP13A4Q4VNC1 1196 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 ACSBG2Q5FVE4 666 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 HYIQ5T013 277 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 SERPINB11Q96P15 392 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 TEFMQ96QE5 360 aaKnown RBP12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC9A7Q96T83 725 aa12.78□□□□□ -0.36
SYNCRIP-201ENST00000355238 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms