RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 HEATR4Q86WZ0 1026 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 PDZD8Q8NEN9 1154 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 ADAM32Q8TC27 787 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 RNF157Q96PX1 679 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 FRMD8P1Q9BZ68 369 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-203ENST00000354674 TLE6Q9H808 572 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 MAN1C1Q9NR34 630 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 TBC1D23Q9NUY8 699 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 GPATCH2LQ9NWQ4 482 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 DMTF1Q9Y222 760 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 INSL5Q9Y5Q6 135 aa10.22□□□□□ -0.77
SYNE1-203ENST00000354674 GRXCR1A8MXD5 290 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 CBFA2T3O75081 653 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 ETFBP38117 255 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 C21orf59P57076 290 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 ERVK-21P61565 698 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 IRX4P78413 519 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 MYBPC1Q00872 1141 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 WASHC5Q12768 1159 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 MMRN1Q13201 1228 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 NME3Q13232 169 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 DHX34Q14147 1143 aaKnown RBP10.21□□□□□ -0.77
SYNE1-203ENST00000354674 TIGD2Q4W5G0 525 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 SYCP2LQ5T4T6 812 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 ARTNQ5T4W7 220 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 SLC9A4Q6AI14 798 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 NANOGP8Q6NSW7 305 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 DCDC5Q6ZRR9 648 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 SPRED2Q7Z698 418 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 PQLC3Q8N755 202 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 POF1BQ8WVV4 589 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 SLC39A13Q96H72 371 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 SH3GL1Q99961 368 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 TCF25Q9BQ70 676 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 TRIM55Q9BYV6 548 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 MAGEB5Q9BZ81 275 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 PLGRKTQ9HBL7 147 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 TLR9Q9NR96 1032 aa10.21□□□□□ -0.77
SYNE1-203ENST00000354674 OLA1Q9NTK5 396 aaKnown RBP10.21□□□□□ -0.77
SYNE1-203ENST00000354674 CHD9Q3L8U1 2897 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 TRAFD1O14545 582 aaPredicted RBP10.21□□□□□ -0.78
SYNE1-203ENST00000354674 CHEK2O96017 543 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 BGNP21810 368 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 S100A1P23297 94 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.78
SYNE1-203ENST00000354674 ALDH1A3P47895 512 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 BNIP3Q12983 259 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 ITGA9Q13797 1035 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 BRMS1LQ5PSV4 323 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 ZFYVE27Q5T4F4 411 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 RTL10Q7L3V2 364 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 EMILIN2Q9BXX0 1053 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 RSL24D1Q9UHA3 163 aaKnown RBP10.21□□□□□ -0.78
SYNE1-203ENST00000354674 ANAPC5Q9UJX4 755 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 TLR6Q9Y2C9 796 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 DTNAQ9Y4J8 743 aa10.21□□□□□ -0.78
SYNE1-203ENST00000354674 ANKRD34BA5PLL1 514 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 FAM187AA6NFU0 413 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 KCNU1A8MYU2 1149 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 CDH16O75309 829 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 SEC24DO94855 1032 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ADH1AP07327 375 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 HCAR3P49019 387 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 PPP2R5DQ14738 602 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ZNF423Q2M1K9 1284 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 PGS1Q32NB8 556 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 DEPDC1Q5TB30 811 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 KAZNQ674X7 775 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 NEPROQ6NW34 567 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 PTAR1Q7Z6K3 402 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 SDR16C5Q8N3Y7 309 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 PCDH19Q8TAB3 1148 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 PSMG2Q969U7 264 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 SERPINB11Q96P15 392 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 MAK16Q9BXY0 300 aaKnown RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ROPN1BQ9BZX4 212 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 OSBPL2Q9H1P3 480 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 WDCPQ9H6R7 721 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ROPN1Q9HAT0 212 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 S100A14Q9HCY8 104 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 DKK3Q9UBP4 350 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 YBX2Q9Y2T7 364 aaKnown RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ST14Q9Y5Y6 855 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 CEPT1Q9Y6K0 416 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 CROCCQ5TZA2 2017 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 HIDE1A8MVS5 230 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 PRR5-ARHGAP8B1AHC4 643 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 APOC4-APOC2K7ER74 178 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 LIASO43766 372 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 CST8O60676 142 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 KRT75O95678 551 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 IGLV3-27P01718 113 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 APOC2P02655 101 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 CA3P07451 260 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 NR4A2P43354 598 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 PPP3CCP48454 512 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 CLK3P49761 638 aaKnown RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ZNF135P52742 658 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ACTR3P61158 418 aa10.2□□□□□ -0.78
SYNE1-203ENST00000354674 ARHGAP8P85298 464 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms