RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 GSRP00390 522 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 C2P06681 752 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 EPHA5P54756 1037 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 NSUN2Q08J23 767 aaKnown RBP eCLIP18.63■□□□□ 0.57
TRIM41-202ENST00000351937 MPPE1Q53F39 396 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 CLEC14AQ86T13 490 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 TTC16Q8NEE8 873 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 ZNF398Q8TD17 642 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 DDI1Q8WTU0 396 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 C17orf80Q9BSJ5 609 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 GGT7Q9UJ14 662 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 ARHGAP26Q9UNA1 814 aa18.63■□□□□ 0.57
TRIM41-202ENST00000351937 LEFTY2O00292 366 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 NRG2O14511 850 aaPredicted RBP18.62■□□□□ 0.57
TRIM41-202ENST00000351937 SNAP91O60641 907 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 CSPG5O95196 566 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 PROCP04070 461 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 CHRM1P11229 460 aaPredicted RBP18.62■□□□□ 0.57
TRIM41-202ENST00000351937 SYN1P17600 705 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 MPP1Q00013 466 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 GALNT3Q14435 633 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 MFN1Q8IWA4 741 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 BBS7Q8IWZ6 715 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 LMNTD2Q8IXW0 634 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 ACVR1CQ8NER5 493 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 ALG14Q96F25 216 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRIM41-202ENST00000351937 TMEM216Q9P0N5 145 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 RIMKLBQ9ULI2 386 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 ANKRD6Q9Y2G4 727 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 USH1CQ9Y6N9 552 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 TMCC1O94876 653 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 PTPN2P17706 415 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 DDX6P26196 483 aaKnown RBP eCLIP18.62■□□□□ 0.575e-6■■■■□ 21.6
TRIM41-202ENST00000351937 CSKP41240 450 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 CD151P48509 253 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 TMPRSS15P98073 1019 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 ACVR1Q04771 509 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 USP10Q14694 798 aaKnown RBP18.62■□□□□ 0.57
TRIM41-202ENST00000351937 CHI3L2Q15782 390 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 LCA5Q86VQ0 697 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 DCAF4L2Q8NA75 395 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 BLOC1S5Q8TDH9 187 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 EXOC2Q96KP1 924 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 MFSD1Q9H3U5 465 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 HCFC1R1Q9NWW0 138 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 TLK1Q9UKI8 766 aa18.62■□□□□ 0.57
TRIM41-202ENST00000351937 CCR2P41597 374 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 DLG2Q15700 870 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 FASTKD1Q53R41 847 aaKnown RBP18.61■□□□□ 0.57
TRIM41-202ENST00000351937 LINGO4Q6UY18 593 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 GALNT7Q86SF2 657 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 GBP7Q8N8V2 638 aaPredicted RBP18.61■□□□□ 0.57
TRIM41-202ENST00000351937 NSMCE3Q96MG7 304 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 C7orf26Q96N11 449 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 TDRD1Q9BXT4 1180 aaKnown RBP18.61■□□□□ 0.57
TRIM41-202ENST00000351937 TRIM55Q9BYV6 548 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 DNMT3BQ9UBC3 853 aaKnown RBP18.61■□□□□ 0.57
TRIM41-202ENST00000351937 PRKCGP05129 697 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 ALDH3A1P30838 453 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 IRX4P78413 519 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 BST1Q10588 318 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 SHKBP1Q8TBC3 707 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 WFDC5Q8TCV5 224 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 THOC1Q96FV9 657 aaKnown RBP18.61■□□□□ 0.57
TRIM41-202ENST00000351937 RMDN2Q96LZ7 410 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 NPHS2Q9NP85 383 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 MAN1C1Q9NR34 630 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 KLC4Q9NSK0 619 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 VPS51Q9UID3 782 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 CHKBQ9Y259 395 aa18.61■□□□□ 0.57
TRIM41-202ENST00000351937 DNAJC8O75937 253 aaPredicted RBP18.6■□□□□ 0.57
TRIM41-202ENST00000351937 RB1P06400 928 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 HOXA9P31269 272 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 LEPRP48357 1165 aaKnown RBP18.6■□□□□ 0.57
TRIM41-202ENST00000351937 PRAMEP78395 509 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 GPR158Q5T848 1215 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 RAPH1Q70E73 1250 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 C10orf82Q8WW14 230 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 HDAC10Q969S8 669 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 C2orf49Q9BVC5 232 aaPredicted RBP18.6■□□□□ 0.57
TRIM41-202ENST00000351937 SLC12A4Q9UP95 1085 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 FAM95CA0A1B0GW59 222 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 E2F8A0AVK6 867 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 RFPL2O75678 378 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 TAF1BQ53T94 588 aaPredicted RBP18.6■□□□□ 0.57
TRIM41-202ENST00000351937 RALGPS1Q5JS13 557 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 PLD6Q8N2A8 252 aaKnown RBP18.6■□□□□ 0.57
TRIM41-202ENST00000351937 OR6P1Q8NGX9 317 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 BHMTQ93088 406 aa18.6■□□□□ 0.57
TRIM41-202ENST00000351937 MTCL1Q9Y4B5 1905 aaKnown RBP18.59■□□□□ 0.57
TRIM41-202ENST00000351937 HAUS5O94927 633 aa18.59■□□□□ 0.57
TRIM41-202ENST00000351937 CRTAMO95727 393 aa18.59■□□□□ 0.57
TRIM41-202ENST00000351937 COL6A2P12110 1019 aa18.59■□□□□ 0.57
TRIM41-202ENST00000351937 AVPR1AP37288 418 aa18.59■□□□□ 0.57
TRIM41-202ENST00000351937 CCDC15Q0P6D6 951 aa18.59■□□□□ 0.57
TRIM41-202ENST00000351937 OVGP1Q12889 678 aa18.59■□□□□ 0.57
TRIM41-202ENST00000351937 ILF2Q12905 390 aaKnown RBP18.59■□□□□ 0.57
TRIM41-202ENST00000351937 SLC12A1Q13621 1099 aa18.59■□□□□ 0.57
TRIM41-202ENST00000351937 RETSATQ6NUM9 610 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms