RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 HSPA1BP0DMV9 641 aaKnown RBP13.35□□□□□ -0.27
IFT88-202ENST00000351808 TNNI1P19237 187 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 M6PRP20645 277 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 GRIA4P48058 902 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 POLD2P49005 469 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 VBP1P61758 197 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 DPY19L1Q2PZI1 675 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 FLAD1Q8NFF5 587 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 HMGCLL1Q8TB92 370 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 C2orf49Q9BVC5 232 aaPredicted RBP13.35□□□□□ -0.27
IFT88-202ENST00000351808 TMEM181Q9P2C4 612 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 TBX20Q9UMR3 447 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 B8ZZF3 427 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 POLR1CO15160 346 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 ITGBL1O95965 494 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 NTRK1P04629 796 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 CAPN1P07384 714 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 CRHBPP24387 322 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 ABCG1P45844 678 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 NAGLUP54802 743 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 MCCD1P59942 119 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 CTAG1AP78358 180 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 SNX17Q15036 470 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 FER1L6Q2WGJ9 1857 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 SLC39A4Q6P5W5 647 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 TP53I13Q8NBR0 393 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 C12orf10Q9HB07 376 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 CENPXA8MT69 81 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 MRASO14807 208 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 ALBP02768 609 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 MT-ND1P03886 318 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 HTR1AP08908 422 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 ARP10275 920 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 POLR2CP19387 275 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 NAB1Q13506 487 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 ZBTB41Q5SVQ8 909 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 TDRD10Q5VZ19 366 aaKnown RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 TBPL2Q6SJ96 375 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 CCBE1Q6UXH8 406 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 LINC00299Q6ZSB3 139 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 SLC22A15Q8IZD6 547 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 DCLK2Q8N568 766 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 MCUQ8NE86 351 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 PIK3C3Q8NEB9 887 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 SLC22A17Q8WUG5 538 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 JPH3Q8WXH2 748 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 CAB39LQ9H9S4 337 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 PAQR5Q9NXK6 330 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 HAT1O14929 419 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 ERVK-10P10266 1014 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 C7P10643 843 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 PSMA4P25789 261 aaKnown RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 MIPP30301 263 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 SERPINB10P48595 397 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 GP2P55259 537 aaKnown RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 CDH6P55285 790 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 WNT7BP56706 349 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 POU6F1Q14863 301 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 ZFP69Q49AA0 526 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 OTUD3Q5T2D3 398 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 AGAP6Q5VW22 663 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 SIMC1Q8NDZ2 872 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 FAM83FQ8NEG4 500 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 OR5H6Q8NGV6 325 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 GIPC2Q8TF65 315 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 TRIM63Q969Q1 353 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 OMA1Q96E52 524 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 SLC45A3Q96JT2 553 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 AGAP4Q96P64 663 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 DSN1Q9H410 356 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 OXSMQ9NWU1 459 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 UBA2Q9UBT2 640 aaPredicted RBP13.34□□□□□ -0.27
IFT88-202ENST00000351808 SARDHQ9UL12 918 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 FIS1Q9Y3D6 152 aa13.34□□□□□ -0.27
IFT88-202ENST00000351808 CCDC78A2IDD5 438 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 ISPDA4D126 451 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 SNTNA6NMZ2 147 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 SRP72O76094 671 aaKnown RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 NAGAP17050 411 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 LRPAP1P30533 357 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 CYP2C18P33260 490 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 SNRPFP62306 86 aaKnown RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 PRKAA1Q13131 559 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 PRPSAP1Q14558 356 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 INPP5AQ14642 412 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 SKIV2LQ15477 1246 aaKnown RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 PXDC1Q5TGL8 231 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 IRAK1BP1Q5VVH5 260 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 C15orf39Q6ZRI6 1047 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 WDTC1Q8N5D0 677 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 LEMD2Q8NC56 503 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 PSD4Q8NDX1 1056 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 IL1RL2Q9HB29 575 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 MYO18AQ92614 2054 aaKnown RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 DOT1LQ8TEK3 1739 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 PDZK1P1A8MUH7 402 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms