RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 MARCH4Q9P2E8 410 aaPredicted RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 TCAF1Q9Y4C2 921 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 ATP6AP2A0A1C7CYW4 349 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 ATP6AP2O75787 350 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 CCDC166P0CW27 439 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 CST5P28325 142 aaPredicted RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 TRIM60Q495X7 471 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 SPDYAQ5MJ70 313 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 DENND5AQ6IQ26 1287 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 TIGD7Q6NT04 549 aaPredicted RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 MFSD6LQ8IWD5 586 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 MAPK15Q8TD08 544 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 DIS3LQ8TF46 1054 aaKnown RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 DNAJC1Q96KC8 554 aaKnown RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 CATSPER2Q96P56 530 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 GPAMQ9HCL2 828 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 NEU3Q9UQ49 428 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 LIN7AO14910 233 aaPredicted RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 FKTNO75072 461 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 TACR2P21452 398 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 SLC6A4P31645 630 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 ATP5C1P36542 298 aaKnown RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 CDH13P55290 713 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 ARL13AQ5H913 290 aaPredicted RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 NADSYN1Q6IA69 706 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 TPGS1Q6ZTW0 290 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 OTOP2Q7RTS6 562 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 SREK1Q8WXA9 508 aaKnown RBP14.01□□□□□ -0.17
TRIM4-201ENST00000349062 SKA1Q96BD8 255 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 OR52B2Q96RD2 323 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 FCRL5Q96RD9 977 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 LRCH1Q9Y2L9 728 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 COMMD10Q9Y6G5 202 aa14.01□□□□□ -0.17
TRIM4-201ENST00000349062 SNAP91O60641 907 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 TRIM13O60858 407 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 WFS1O76024 890 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 PSMG1O95456 288 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 GSRP00390 522 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 IGLV3-25P01717 112 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 FAM163BP0C2L3 166 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 SLC2A3P11169 496 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 BMP1P13497 986 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 PAMP19021 973 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 TCN1P20061 433 aaPredicted RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 CD151P48509 253 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 SIRPB2Q5JXA9 342 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 IZUMO2Q6UXV1 221 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 NPAS4Q8IUM7 802 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 PGBD5Q8N414 524 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 LZTR1Q8N653 840 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 ABCG8Q9H221 673 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 ALG9Q9H6U8 611 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 ATP13A1Q9HD20 1204 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 ERI2A8K979 691 aaKnown RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 SEC24AO95486 1093 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 PYGLP06737 847 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 ACADSP16219 412 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 CORO1AP31146 461 aaKnown RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 RPS6KA3P51812 740 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 SLC34A1Q06495 639 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 CCDC15Q0P6D6 951 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 CTC1Q2NKJ3 1217 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 TCHHL1Q5QJ38 904 aaPredicted RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 C1orf146Q5VVC0 180 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 TMC7Q7Z402 723 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 LPCAT1Q8NF37 534 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 TMEM169Q96HH4 297 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 ENTPD7Q9NQZ7 604 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 KCNK4Q9NYG8 393 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 CHD7Q9P2D1 2997 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 JUNP05412 331 aaKnown RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 MBL2P11226 248 aaPredicted RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 ARNTP27540 789 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 NSUN2Q08J23 767 aaKnown RBP eCLIP14□□□□□ -0.17
TRIM4-201ENST00000349062 LBRQ14739 615 aaKnown RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 DCBLD1Q8N8Z6 715 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 B4GALNT2Q8NHY0 566 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 HEXDCQ8WVB3 486 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 C7orf26Q96N11 449 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 IL12RB2Q99665 862 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 SMG9Q9H0W8 520 aaKnown RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 RHOJQ9H4E5 214 aa14□□□□□ -0.17
TRIM4-201ENST00000349062 UTP6Q9NYH9 597 aaKnown RBP14□□□□□ -0.17
TRIM4-201ENST00000349062 RHOQP17081 205 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 GKP32189 559 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 RGRP47804 291 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 IDH3AP50213 366 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 CSE1LP55060 971 aaKnown RBP13.99□□□□□ -0.17
TRIM4-201ENST00000349062 GPR17Q13304 367 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 GPR158Q5T848 1215 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 C6orf163Q5TEZ5 329 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 MAVSQ7Z434 540 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 FAM126BQ8IXS8 530 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 ESAMQ96AP7 390 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 SLC22A12Q96S37 553 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 RNF38Q9H0F5 515 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 MAGEB16A2A368 324 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 C9JVG2 144 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 SYN3O14994 580 aa13.99□□□□□ -0.17
TRIM4-201ENST00000349062 VNN2O95498 520 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms