RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 USP22Q9UPT9 525 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 SNX9Q9Y5X1 595 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 YDJCA8MPS7 323 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 SNPHO15079 494 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 POLBP06746 335 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 SPRP35270 261 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-201ENST00000349038 CXCR3P49682 368 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 TUBA4AP68366 448 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 SELENBP1Q13228 472 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 TNIP2Q8NFZ5 429 aa15.28■□□□□ 0.04
PTBP1-201ENST00000349038 NDRG1Q92597 394 aaKnown RBP15.28■□□□□ 0.04
PTBP1-201ENST00000349038 KIAA1522Q9P206 1035 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-201ENST00000349038 SYCE1LA8MT33 242 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 G3V2L1 256 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 HUS1O60921 280 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 PSMA4P25789 261 aaKnown RBP15.27■□□□□ 0.04
PTBP1-201ENST00000349038 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
PTBP1-201ENST00000349038 PAGE2Q7Z2X7 111 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 SYTL1Q8IYJ3 562 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 CSF3RQ99062 836 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 RAP2CQ9Y3L5 183 aa15.27■□□□□ 0.04
PTBP1-201ENST00000349038 NOBOXO60393 691 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 GJB1P08034 283 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 FSHRP23945 695 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 CCND2P30279 289 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 SDC4P31431 198 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 NAMPTP43490 491 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 ACADVLP49748 655 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 IFRD2Q12894 506 aaPredicted RBP15.27■□□□□ 0.03
PTBP1-201ENST00000349038 PDK2Q15119 407 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 TRNP1Q6NT89 227 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 DCLRE1AQ6PJP8 1040 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 EPHX4Q8IUS5 362 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 SULF1Q8IWU6 871 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 CMTR2Q8IYT2 770 aaKnown RBP15.27■□□□□ 0.03
PTBP1-201ENST00000349038 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 NANOGQ9H9S0 305 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 CACNA2D2Q9NY47 1150 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 HACD3Q9P035 362 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 PADI4Q9UM07 663 aa15.27■□□□□ 0.03
PTBP1-201ENST00000349038 AP3M2P53677 418 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 SLC12A2P55011 1212 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 CSHL1Q14406 222 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 GRM3Q14832 879 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ABHD15Q6UXT9 468 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 SPATC1Q76KD6 591 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 WDR49Q8IV35 697 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 NXNL1Q96CM4 212 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 PORCNQ9H237 461 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ATXN3LQ9H3M9 355 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 CSADQ9Y600 493 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 U3KQV3 271 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 MAFGO15525 162 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 MICAL2O94851 1124 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ASNSP08243 561 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 GOT1P17174 413 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 SLC7A1P30825 629 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 GJA9P57773 515 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 LAMC2Q13753 1193 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 XKR3Q5GH77 459 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ATAD3BQ5T9A4 648 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 DHRS4L2Q6PKH6 230 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 SCIMPQ6UWF3 145 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 FAM183BPQ6ZVS7 135 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 AKAP14Q86UN6 197 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 FSTL5Q8N475 847 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-201ENST00000349038 LRRC71Q8N4P6 559 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 TRUB1Q8WWH5 349 aaKnown RBP15.26■□□□□ 0.03
PTBP1-201ENST00000349038 FIG4Q92562 907 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 PRRG3Q9BZD7 231 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 C6orf62Q9GZU0 229 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-201ENST00000349038 HMG20AQ9NP66 347 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 RIC8BQ9NVN3 520 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 BAG5Q9UL15 447 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 RGS20O76081 388 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ENDOD1O94919 500 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ARL2P36404 184 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 STX5Q13190 355 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ANKRD34AQ69YU3 496 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ABI1Q8IZP0 508 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.26■□□□□ 0.033e-9■■■■■ 36.5
PTBP1-201ENST00000349038 HDAC11Q96DB2 347 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 SH3YL1Q96HL8 342 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-201ENST00000349038 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 JPH1Q9HDC5 661 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-201ENST00000349038 MOCS1Q9NZB8 636 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 SEPT3Q9UH03 358 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ITGB1BP2Q9UKP3 347 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 ERVK-11Q9UQG0 969 aa15.26■□□□□ 0.03
PTBP1-201ENST00000349038 INO80B-WBP1J3KQ70 363 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 RNF103O00237 685 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 NR3C2P08235 984 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 BDNFP23560 247 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
PTBP1-201ENST00000349038 PHC1P78364 1004 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 GRM1Q13255 1194 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 MEP1AQ16819 746 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms