RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 LMNB2Q03252 620 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 ELP6Q0PNE2 266 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 PRPSAP1Q14558 356 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 CCNG2Q16589 344 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 PLK5Q496M5 336 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 WDR45BQ5MNZ6 344 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 ARMC12Q5T9G4 340 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 ALG1LQ6GMV1 187 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 NCEH1Q6PIU2 408 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 ADAT2Q7Z6V5 191 aaKnown RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 CAMK1DQ8IU85 385 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 PGBD5Q8N414 524 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 AADATQ8N5Z0 425 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 FAM160A2Q8N612 972 aaPredicted RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 LRRN4Q8WUT4 740 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 FEM1CQ96JP0 617 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 HERPUD2Q9BSE4 406 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 ADGRE3Q9BY15 652 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 PREBQ9HCU5 417 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 RNF14Q9UBS8 474 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 FEZ2Q9UHY8 353 aaPredicted RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 SAR1BQ9Y6B6 198 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 PTPRZ1P23471 2315 aaPredicted RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 ZFHX2Q9C0A1 2572 aaPredicted RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 SPAG17Q6Q759 2223 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 MUC22E2RYF6 1773 aaPredicted RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 NYNRINQ9P2P1 1898 aaKnown RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 GOLGA6CA6NDK9 693 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 GOLGA6BA6NDN3 693 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 MEI4A8MW99 385 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 KIF2AO00139 706 aaPredicted RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 TSPAN6O43657 245 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 AP1G1O43747 822 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 OPHN1O60890 802 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 PCDH8O95206 1070 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 HLA-DQB2P05538 268 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 GOLGA6DP0CG33 693 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 ADRB3P13945 408 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 PTPN3P26045 913 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 CASQ1P31415 396 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 ACSL1P33121 698 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 DRD3P35462 400 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 PAFAH1B1P43034 410 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 RGRP47804 291 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 DHPSP49366 369 aaPredicted RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 EPHB1P54762 984 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 ADPRHP54922 357 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 RPL26P61254 145 aaKnown RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 ZBTB17Q13105 803 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 SRSF5Q13243 272 aaKnown RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 UGP2Q16851 508 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 PAPD7Q5XG87 772 aaKnown RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 PMS2CLQ68D20 193 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 LAIR1Q6GTX8 287 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 RABEPKQ7Z6M1 372 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 TMEFF1Q8IYR6 380 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 RASGEF1CQ8N431 466 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNCA-202ENST00000345009 SLC35B2Q8TB61 432 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 ACTRT1Q8TDG2 376 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 PDCD6IPQ8WUM4 868 aaKnown RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 ARRDC3Q96B67 414 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 ZNF419Q96HQ0 510 aaPredicted RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 WDR24Q96S15 920 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 GLOD4Q9HC38 313 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 VPS45Q9NRW7 570 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 GOLGA6AQ9NYA3 693 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 RSPH14Q9UHP6 348 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 MBD1Q9UIS9 605 aaPredicted RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 RPL26L1Q9UNX3 145 aaKnown RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 PCDHGC4Q9Y5F7 938 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 RAI2Q9Y5P3 530 aa11.94□□□□□ -0.5
SNCA-202ENST00000345009 EP300Q09472 2414 aaPredicted RBP11.94□□□□□ -0.5
SNCA-202ENST00000345009 TCRBV7S2A1N4TA0A589 114 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 C5orf60A6NFR6 353 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 METTL12A8MUP2 240 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 UPK3BL1B0FP48 263 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 UPK3BL2E5RIL1 263 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 HTRA2O43464 458 aaPredicted RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 LIASO43766 372 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 ANXA9O76027 345 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 FSBPO95073 299 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 PIGNO95427 931 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 ITGAVP06756 1048 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 GNSP15586 552 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 TIMP2P16035 220 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 BCKDHBP21953 392 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 CD86P42081 329 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 CCR5P51681 352 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 RPS21P63220 83 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 DSC2Q02487 901 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 NHLH1Q02575 133 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 WASHC5Q12768 1159 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 SGCGQ13326 291 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 SLC14A2Q15849 920 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 PIP5KL1Q5T9C9 394 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms