RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SEPT10Q9P0V9 454 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 BCCIPQ9P287 314 aaKnown RBP eCLIP13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 FETUBQ9UGM5 382 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 LGALS13Q9UHV8 139 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 DNMT3LQ9UJW3 386 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 TRHDEQ9UKU6 1024 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC6A14Q9UN76 642 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 NOVA2Q9UNW9 492 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 NBEAQ8NFP9 2946 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 IGLV3-10A0A075B6K4 115 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 TLDC2A0PJX2 215 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 CDH16O75309 829 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 SERPINF2P08697 491 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 GSTA2P09210 222 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 MLNP12872 115 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 RHOQP17081 205 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 CCNCP24863 283 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 PTPN3P26045 913 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 ATP5C1P36542 298 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 TNFRSF4P43489 277 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 AUHQ13825 339 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 HNRNPDQ14103 355 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 MSS51Q4VC12 460 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 TNFAIP8L3Q5GJ75 292 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 HECTD3Q5T447 861 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 ARTNQ5T4W7 220 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 TDRPQ86YL5 185 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 MIB1Q86YT6 1006 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 ARHGAP12Q8IWW6 846 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 ZNF683Q8IZ20 524 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 ZNF567Q8N184 647 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 PHTF2Q8N3S3 785 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 HDDC3Q8N4P3 179 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 CHCHD4Q8N4Q1 142 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 FBXO36Q8NEA4 188 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 HMGB4Q8WW32 186 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 PLD4Q96BZ4 506 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 FSCN3Q9NQT6 498 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 TMEM248Q9NWD8 314 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 KLHL8Q9P2G9 620 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 GPSM3Q9Y4H4 160 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 CPQQ9Y646 472 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 TEX264Q9Y6I9 313 aa13.69□□□□□ -0.22
HERPUD1-202ENST00000344114 GON4LQ3T8J9 2241 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 EXOC1LA0A1B0GW35 172 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 TCRBV21S2A2A0A5A6 115 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 SMIM23A6NLE4 172 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 ERI2A8K979 691 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 TBX18O95935 607 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 OAS1P00973 400 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 CFIP05156 583 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 CD59P13987 128 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 PSMB4P28070 264 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 GRIA2P42262 883 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 MAGEA3P43357 314 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 LMAN1P49257 510 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 NDST2P52849 883 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 PPP2R2AP63151 447 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 RASA2Q15283 850 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 LONRF1Q17RB8 773 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 ZNF423Q2M1K9 1284 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 KLHL38Q2WGJ6 581 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 AFMIDQ63HM1 303 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 TAOK1Q7L7X3 1001 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 RABEPKQ7Z6M1 372 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 C14orf80Q86SX3 495 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 NLRP14Q86W24 1093 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 ANKMY2Q8IV38 441 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 TP53INP2Q8IXH6 220 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 WDR83Q9BRX9 315 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 ZYG11BQ9C0D3 744 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 GBA3Q9H227 469 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 RETREG1Q9H6L5 497 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 CNOT10Q9H9A5 744 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 DNAAF2Q9NVR5 837 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC24A2Q9UI40 661 aa13.68□□□□□ -0.22
HERPUD1-202ENST00000344114 ITPR1Q14643 2758 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 SHOX2O60902 331 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 BANF1O75531 89 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 ADH1CP00326 375 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 ADH5P11766 374 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 GABRG2P18507 467 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 ELK3P41970 407 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 ATXN3P54252 364 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 GPX6P59796 221 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 IFI35P80217 286 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 KDSRQ06136 332 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 TEX44Q53QW1 395 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC36A4Q6YBV0 504 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 ZNF534Q76KX8 674 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 PID1Q7Z2X4 250 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 CAND1Q86VP6 1230 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 CHSY1Q86X52 802 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 UMODL1-AS1Q8N2C9 162 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms