RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PAIP1Q9H074 479 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 KLQ9UEF7 1012 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 POMPQ9Y244 141 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 MYH10P35580 1976 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 GNG14A0A1W2PPG7 69 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 MGAT4DA6NG13 374 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 LIN7AO14910 233 aaPredicted RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 KDM1AO60341 852 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PARNO95453 639 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 NELFEP18615 380 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 MSH3P20585 1137 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 NMBRP28336 390 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ATP6V0D1P61421 351 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 SLC18A2Q05940 514 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ZNF284Q2VY69 593 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 NOMO2Q5JPE7 1267 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 OLFML1Q6UWY5 402 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 GK5Q6ZS86 529 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 LDB1Q86U70 411 aaPredicted RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 IGDCC3Q8IVU1 814 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 DENND6AQ8IWF6 608 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 DSELQ8IZU8 1212 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PQLC3Q8N755 202 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ADCY4Q8NFM4 1077 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CAMKK2Q96RR4 588 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PCYT2Q99447 389 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CCDC28BQ9BUN5 200 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TEX12Q9BXU0 123 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 EIF2B3Q9NR50 452 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 DNAJC28Q9NX36 388 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 EGFL7Q9UHF1 273 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 A0A0G2JLL6 359 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 ATG7O95352 703 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 VCLP18206 1134 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 SP100P23497 879 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 CCNCP24863 283 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 CDH5P33151 784 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 EPHB3P54753 998 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 IL5RAQ01344 420 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 MAD2L1Q13257 205 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 PRRT2Q7Z6L0 340 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 DEFB128Q7Z7B8 93 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 SLC44A2Q8IWA5 706 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 STK40Q8N2I9 435 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 AGO3Q9H9G7 860 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 LEF1Q9UJU2 399 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 COMMD3-BMI1R4GMX3 469 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 ARFGEF2Q9Y6D5 1785 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 A8MX80 341 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PTGES3LE9PB15 166 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 KLF11O14901 512 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 DDX5P17844 614 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 CYP3A5P20815 502 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PAX3P23760 479 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 TKTP29401 623 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 CLCNKBP51801 687 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 BCL2L1Q07817 233 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 HECTD3Q5T447 861 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 UBAP2Q5T6F2 1119 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 HERC6Q8IVU3 1022 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 TTC30BQ8N4P2 665 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PIWIL1Q96J94 861 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 C1orf50Q9BV19 199 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 MLPHQ9BV36 600 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 CIPCQ9C0C6 399 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PIGVQ9NUD9 493 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 FZD10Q9ULW2 581 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PADI3Q9ULW8 664 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 IRS2Q9Y4H2 1338 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 FAM159BA6NKW6 160 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 F8W810 466 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 CD3EAPO15446 510 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 S100A3P33764 101 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 IDH3AP50213 366 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 WNT7BP56706 349 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 RALGDSQ12967 914 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 LIN52Q52LA3 116 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 WDTC1Q8N5D0 677 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 OR4L1Q8NH43 312 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 LENG1Q96BZ8 264 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 UROC1Q96N76 676 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 TXLNGYQ9BZA5 131 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 ASB8Q9H765 288 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 DHRS12A0PJE2 317 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PEX2P28328 305 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 SCNN1AP37088 669 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 RUNX1T1Q06455 604 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 CSTF3Q12996 717 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 DCTN2Q13561 401 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 B3GNT6Q6ZMB0 384 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 FBXO30Q8TB52 745 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 MCOLN3Q8TDD5 553 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 PEBP4Q96S96 227 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 C2orf49Q9BVC5 232 aaPredicted RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 EMILIN2Q9BXX0 1053 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 UGT2B28Q9BY64 529 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 ADAM7Q9H2U9 754 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 EBF2Q9HAK2 575 aa7.23□□□□□ -1.25
VCAN-202ENST00000342785 DDX28Q9NUL7 540 aaKnown RBP7.23□□□□□ -1.25
VCAN-202ENST00000342785 ARL15Q9NXU5 204 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms