RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SUMF1Q8NBK3 374 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
TUBD1-202ENST00000340993 OSBPL9Q96SU4 736 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 CARD9Q9H257 536 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 TMEM74BQ9NUR3 256 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 RAI2Q9Y5P3 530 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 TP53BP1Q12888 1972 aaPredicted RBP13.33□□□□□ -0.28
TUBD1-202ENST00000340993 LRRC72A6NJI9 287 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 FANCGO15287 622 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 SLC31A1O15431 190 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 RNGTTO60942 597 aaKnown RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 IFNB1P01574 187 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 PDHA1P08559 390 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 ALPIP09923 528 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 TIMP2P16035 220 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 CNR2P34972 360 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 IFI35P80217 286 aaPredicted RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 SPEM2Q0P670 501 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 GALNT3Q14435 633 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 TEX44Q53QW1 395 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 SLC36A4Q6YBV0 504 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 CDKL3Q8IVW4 592 aaPredicted RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 ZCCHC9Q8N567 271 aaKnown RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 BIRC7Q96CA5 298 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 IL12RB2Q99665 862 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 OSBPL1AQ9BXW6 950 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 SGK2Q9HBY8 427 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 PCDH12Q9NPG4 1184 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 RSPH14Q9UHP6 348 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 SCML1Q9UN30 329 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 ZNF292O60281 2723 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 A0A1W2PQU0 124 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 MMP20O60882 483 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 CPP00450 1065 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 ETS1P14921 441 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 CR2P20023 1033 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 MSNP26038 577 aaKnown RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 CD68P34810 354 aaPredicted RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 HSPA9P38646 679 aaKnown RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 KCNJ1P48048 391 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 AP1S1P61966 158 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 NSUN2Q08J23 767 aaKnown RBP eCLIP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 OLIG2Q13516 323 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 LPCAT1Q8NF37 534 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 ARRDC2Q8TBH0 407 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 CPEB1Q9BZB8 566 aaKnown RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 EBF2Q9HAK2 575 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 GLOD4Q9HC38 313 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 GMEB2Q9UKD1 530 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 FZD4Q9ULV1 537 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 EFR3BQ9Y2G0 817 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 ATP8A1Q9Y2Q0 1164 aa13.32□□□□□ -0.28
TUBD1-202ENST00000340993 TDRD6O60522 2096 aaKnown RBP13.32□□□□□ -0.28
TUBD1-202ENST00000340993 CXorf51AA0A1B0GTR3 108 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 HACD1B0YJ81 288 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 TRAFD1O14545 582 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-202ENST00000340993 SPINT1O43278 529 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 CFIP05156 583 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 MMP2P08253 660 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 SERPINF2P08697 491 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 PIRTP0C851 137 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 PSMB4P28070 264 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 EPHB1P54762 984 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 KIAA0895LQ68EN5 471 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 OR2T34Q8NGX1 318 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 NAPGQ99747 312 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-202ENST00000340993 HDAC8Q9BY41 377 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
TUBD1-202ENST00000340993 ZFR2Q9UPR6 939 aaKnown RBP13.31□□□□□ -0.28
TUBD1-202ENST00000340993 ZNF148Q9UQR1 794 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-202ENST00000340993 FADS3Q9Y5Q0 445 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 TMEM131Q92545 1883 aa13.31□□□□□ -0.28
TUBD1-202ENST00000340993 IGLON5A6NGN9 336 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 UPK3BL1B0FP48 263 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 UPK3BL2E5RIL1 263 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 WNT9AO14904 365 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 LIASO43766 372 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 GFRA3O60609 400 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 IGLV3-19P01714 112 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 IGHV4-34P06331 123 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 MPLP40238 635 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SKOR1P84550 965 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SFSWAPQ12872 951 aaKnown RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SPARCL1Q14515 664 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SF3A2Q15428 464 aaKnown RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SIX1Q15475 284 aaPredicted RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 TRIP13Q15645 432 aaPredicted RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 UGP2Q16851 508 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ARMC12Q5T9G4 340 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 PRPF39Q86UA1 669 aaKnown RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 TTC13Q8NBP0 860 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 IPMKQ8NFU5 416 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ZNF592Q92610 1267 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 TEKT5Q96M29 485 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms