RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TSEN2Q8NCE0 465 aaKnown RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 KLK6Q92876 244 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 MYOCQ99972 504 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 ZNF670Q9BS34 389 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 CALN1Q9BXU9 219 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 NHEJ1Q9H9Q4 299 aaPredicted RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 FZD3Q9NPG1 666 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 HAUS2Q9NVX0 235 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 INTUQ9ULD6 942 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 PCDHGA1Q9Y5H4 931 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 WDFY3Q8IZQ1 3526 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 CFAP69A5D8W1 941 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 AKR1B15C9JRZ8 316 aaPredicted RBP13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 INSIG1O15503 277 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 SPINT1O43278 529 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 HYAL3O43820 417 aaPredicted RBP13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 TM7SF2O76062 418 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 TIMP2P16035 220 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 AMPD1P23109 780 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 NFKBIAP25963 317 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 ADKP55263 362 aaKnown RBP13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 YPEL5P62699 121 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 BCL2L1Q07817 233 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 FGL2Q14314 439 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 ZNF235Q14590 738 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 HS1BP3Q53T59 392 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 PRAMEF14Q5SWL7 426 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 TXNRD3NBQ6F5E7 133 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 UNQ6494/PRO21346Q6UXR6 183 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 Q6ZSR6 202 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 PARGQ86W56 976 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 GATAD2AQ86YP4 633 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 KCTD6Q8NC69 237 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 OR13H1Q8NG92 308 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 BMFQ96LC9 184 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 KLF6Q99612 283 aaPredicted RBP13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 ITM2BQ9Y287 266 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 CA5BQ9Y2D0 317 aa13.46□□□□□ -0.25
SIRPB3P-201ENST00000340424 DOCK9Q9BZ29 2069 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 SPTY2D1-AS1A0A0U1RR47 76 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 NEMP2A6NFY4 417 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 ZNF487B1APH4 448 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 H3BM21 787 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 MAFKO60675 156 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 SOCS5O75159 536 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 MTA2O94776 668 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 PIGNO95427 931 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 LDOC1O95751 146 aaPredicted RBP13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 ATXN1LP0C7T5 689 aaKnown RBP13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 ARSEP51690 589 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 CLDN2P57739 230 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 PFN3P60673 137 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 HNRNPKP61978 463 aaKnown RBP eCLIP13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 TBX2Q13207 712 aaPredicted RBP13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 ILKQ13418 452 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 PTK2BQ14289 1009 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 AGERQ15109 404 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 ARHGAP36Q6ZRI8 547 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 KANSL1Q7Z3B3 1105 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 SLCO6A1Q86UG4 719 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 GALNT15Q8N3T1 639 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 CHCHD4Q8N4Q1 142 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 FATE1Q969F0 183 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 CENPTQ96BT3 561 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 ECHDC3Q96DC8 303 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 CNDP2Q96KP4 475 aaKnown RBP13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 MGME1Q9BQP7 344 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 PACSIN1Q9BY11 444 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 TRIM5Q9C035 493 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 GGT7Q9UJ14 662 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 ATP8A1Q9Y2Q0 1164 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 FRYQ5TBA9 3013 aa13.45□□□□□ -0.26
SIRPB3P-201ENST00000340424 POM121BA6NF01 834 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 ENC1O14682 589 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 RAD51BO15315 384 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 BUB1BO60566 1050 aaPredicted RBP13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 MMP20O60882 483 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 PEX11BO96011 259 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 PROS1P07225 676 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 ALPPL2P10696 532 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 IL4RP24394 825 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 MMP12P39900 470 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 RGRP47804 291 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 SCNN1BP51168 640 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 SLC10A7Q0GE19 358 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 BNIP3Q12983 259 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 ZNF211Q13398 564 aaPredicted RBP13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 DPYSL3Q14195 570 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 PAFAH1B3Q15102 231 aaKnown RBP13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 TCEAL1Q15170 157 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 MARC1Q5VT66 337 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 TIGD7Q6NT04 549 aaPredicted RBP13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 CAMK1DQ8IU85 385 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 EID2Q8N6I1 236 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 PAF1Q8N7H5 531 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms