RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 ELNP15502 786 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 CCNIQ14094 377 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 LIN52Q52LA3 116 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 CDYL2Q8N8U2 506 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 C3orf58Q8NDZ4 430 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 CASP10Q92851 521 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 ACOX2Q99424 681 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 HAUS8Q9BT25 410 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 CATSPERBQ9H7T0 1116 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 DMAP1Q9NPF5 467 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 TMEM30AQ9NV96 361 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 ZNHIT2Q9UHR6 403 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 AAR2Q9Y312 384 aaKnown RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 RAP2CQ9Y3L5 183 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 NRCAMQ92823 1304 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 MAP1BP46821 2468 aaKnown RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 E7ENX8 843 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 UBXN8O00124 270 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 LIN7AO14910 233 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 HLA-DQB2P05538 268 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 ODC1P11926 461 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 USP46P62068 366 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 MS4A2Q01362 244 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 PPIDQ08752 370 aaKnown RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 NFYCQ13952 458 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 MAVSQ7Z434 540 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
USP1-201ENST00000339950 CLVS1Q8IUQ0 354 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 GABPB2Q8TAK5 448 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 MAGEE2Q8TD90 523 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 GFM2Q969S9 779 aaKnown RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 SCHIP1Q9P0W5 487 aaPredicted RBP12.03□□□□□ -0.48
USP1-201ENST00000339950 A0A1B0GTW7 788 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 ARL5CA6NH57 179 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 BTN3A1O00481 513 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 MTHFD1P11586 935 aaKnown RBP12.02□□□□□ -0.48
USP1-201ENST00000339950 HGFP14210 728 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 UQCRBP14927 111 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 CTPS1P17812 591 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 PCYT1AP49585 367 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 CNPY1Q3B7I2 92 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 CUZD1Q86UP6 607 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 CNTD1Q8N815 330 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 RNF145Q96MT1 663 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 PARK7Q99497 189 aaKnown RBP12.02□□□□□ -0.48
USP1-201ENST00000339950 THUMPD3Q9BV44 507 aaKnown RBP12.02□□□□□ -0.48
USP1-201ENST00000339950 GLOD4Q9HC38 313 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 MOCS1Q9NZB8 636 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 PCDHGB4Q9UN71 923 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 PCDHGC4Q9Y5F7 938 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 PCDHGB5Q9Y5G0 923 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 ARL5AQ9Y689 179 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 U3KQV3 271 aa12.02□□□□□ -0.48
USP1-201ENST00000339950 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 HACD1B0YJ81 288 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 DAB1O75553 588 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 EFNA1P20827 205 aaPredicted RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 PPARGP37231 505 aaPredicted RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 CHN2P52757 468 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 SLC5A3P53794 718 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 GEMP55040 296 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 ADARP55265 1226 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 TBX4P57082 545 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 CYP51A1Q16850 503 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 CTXN3Q4LDR2 81 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 TIGD2Q4W5G0 525 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 ZNF276Q8N554 614 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 FAM47BQ8NA70 645 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 DTNBP1Q96EV8 351 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 MMADHCQ9H3L0 296 aaPredicted RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 LRFN2Q9ULH4 789 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 TDRKHQ9Y2W6 561 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 AP4S1Q9Y587 144 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 PCDHB12Q9Y5F1 795 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 COPG1Q9Y678 874 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 SCN1AP35498 2009 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 ZNFX1Q9P2E3 1918 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 KANSL1LA0AUZ9 987 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 HEATR9A2RTY3 570 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 MYADML2A6NDP7 307 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 GPR39O43194 453 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 MPOP05164 745 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 KCNA5P22460 613 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 CD68P34810 354 aaPredicted RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 LSM3P62310 102 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 LBRQ14739 615 aaKnown RBP12.02□□□□□ -0.49
USP1-201ENST00000339950 POM121L1PQ3SYA9 428 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 PCID2Q5JVF3 399 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 KIAA0319Q5VV43 1072 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 GLB1LQ6UWU2 654 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 OR7D4Q8NG98 312 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 TEKT5Q96M29 485 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 SORT1Q99523 831 aa12.02□□□□□ -0.49
USP1-201ENST00000339950 RHOJQ9H4E5 214 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms