RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SDE2Q6IQ49 451 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 ZNF852Q6ZMS4 543 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 OR8D1Q8WZ84 308 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 STAMBPL1Q96FJ0 436 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 SHDQ96IW2 340 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 SRPK1Q96SB4 655 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 EBNA1BP2Q99848 306 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 PABPC3Q9H361 631 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 FBRSQ9HAH7 460 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 WNT16Q9UBV4 365 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 IL36AQ9UHA7 158 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 MRPS17Q9Y2R5 130 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 STON1Q9Y6Q2 735 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 ANKRD66B4E2M5 251 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 FZD6O60353 706 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 TTC4O95801 387 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 PRLP01236 227 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 GSTA2P09210 222 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 PRKCHP24723 683 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 NFKBIAP25963 317 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 IL12RB1P42701 662 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 POLR2LP62875 67 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 OLIG2Q13516 323 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 C9orf64Q5T6V5 341 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 CASC4Q6P4E1 433 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 BRAT1Q6PJG6 821 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 KDELC2Q7Z4H8 507 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 CAMK1DQ8IU85 385 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 NDUFAF2Q8N183 169 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 PAF1Q8N7H5 531 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 HCAR2Q8TDS4 363 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 PDCD6IPQ8WUM4 868 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 EZH1Q92800 747 aaPredicted RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 RMDN1Q96DB5 314 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 ECHDC3Q96DC8 303 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 SIGLEC10Q96LC7 697 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 ASB2Q96Q27 587 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 CDC42EP4Q9H3Q1 356 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 SUV39H2Q9H5I1 410 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 ARHGEF3Q9NR81 526 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 CHKBQ9Y259 395 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 PCDHB9Q9Y5E1 797 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 MAD1L1Q9Y6D9 718 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 WASF2Q9Y6W5 498 aa14.65□□□□□ -0.06
NIPAL3-202ENST00000339255 PIGNO95427 931 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 EGFP01133 1207 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 EPHX1P07099 455 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 PGAM1P18669 254 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 MGAT1P26572 445 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 NTSR1P30989 418 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 ELK3P41970 407 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 CHRNA4P43681 627 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 EPHB1P54762 984 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 CCINQ13939 588 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 STARD3Q14849 445 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 FASTKD3Q14CZ7 662 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 GDPD4Q6W3E5 623 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 SLC25A41Q8N5S1 370 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 FBXO36Q8NEA4 188 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 TMIEQ8NEW7 156 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 PPHLN1Q8NEY8 458 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 GRIN3AQ8TCU5 1115 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 NSMCE3Q96MG7 304 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 RANBP9Q96S59 729 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 SEMA4AQ9H3S1 761 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 CACNA2D2Q9NY47 1150 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 HACD3Q9P035 362 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 DKK3Q9UBP4 350 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 ZC3H7BQ9UGR2 993 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 HCN2Q9UL51 889 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 CHMP2BQ9UQN3 213 aa14.64□□□□□ -0.07
NIPAL3-202ENST00000339255 TSPAN11A1L157 253 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 HEATR9A2RTY3 570 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 SYNCRIPO60506 623 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 SIN3BO75182 1162 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 UGT2B4P06133 528 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 POLBP06746 335 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 ABHD2P08910 425 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 BMP1P13497 986 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 HLA-EP13747 358 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 PHBP35232 272 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 PDE1BQ01064 536 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 MTM1Q13496 603 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 CAMK2GQ13555 558 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 GALNT3Q14435 633 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 PCID2Q5JVF3 399 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 DENND2CQ68D51 928 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 NLRP9Q7RTR0 991 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 ZNF366Q8N895 744 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 CHST14Q8NCH0 376 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 LPCAT1Q8NF37 534 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 UBLCP1Q8WVY7 318 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 PEX13Q92968 403 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 PPP1R16AQ96I34 528 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 C9orf72Q96LT7 481 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 GABRG3Q99928 467 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 TRABDQ9H4I3 376 aa14.63□□□□□ -0.07
NIPAL3-202ENST00000339255 MRM3Q9HC36 420 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms