RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 OGFRL1Q5TC84 451 aaPredicted RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 SDE2Q6IQ49 451 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 DAW1Q8N136 415 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 GMCL1Q96IK5 515 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 OXCT2Q9BYC2 517 aaPredicted RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 ZNF696Q9H7X3 374 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 DDX43Q9NXZ2 648 aaKnown RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 GMPPBQ9Y5P6 360 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 MED1Q15648 1581 aaPredicted RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 LOC110117498-PIK3R3F6TDL0 507 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 NOBOXO60393 691 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 RGS20O76081 388 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 ATF4P18848 351 aaPredicted RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 SLC7A1P30825 629 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 OGDHQ02218 1023 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 PRKCQQ04759 706 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 PIGFQ07326 219 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 LINC00523Q86TU6 105 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 SNX29P2Q8IUI4 249 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 CAMKK1Q8N5S9 505 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 OR52K2Q8NGK3 314 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 LATS2Q9NRM7 1088 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 FAM32AQ9Y421 112 aaKnown RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 MRC1P22897 1456 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 A0A1W2PQ72 361 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 NBNO60934 754 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 ERBB2P04626 1255 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 CYP2C9P11712 490 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 AKT1P31749 480 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 DGKZQ13574 1117 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 GRM3Q14832 879 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 CTC1Q2NKJ3 1217 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 LUZP2Q86TE4 346 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 CUZD1Q86UP6 607 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 RAVER1Q8IY67 606 aaKnown RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 C12orf29Q8N999 325 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 SETD9Q8NE22 299 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 SYTL5Q8TDW5 730 aaPredicted RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 FAM167AQ96KS9 214 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 TBCBQ99426 244 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 KATNAL1Q9BW62 490 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 OSBPL10Q9BXB5 764 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 UGT2B28Q9BY64 529 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
COL2A1-201ENST00000337299 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 TBC1D14Q9P2M4 693 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 H3BNH8 94 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 RFPL1O75677 317 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 THRBP10828 461 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 IL7RP16871 459 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PRDX6P30041 224 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 CHSY3Q70JA7 882 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 P2RY8Q86VZ1 359 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 DCBLD1Q8N8Z6 715 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 TFAP2BQ92481 460 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 MFSD14AQ96MC6 490 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 APOL4Q9BPW4 351 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PDCD2LQ9BRP1 358 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 CHRAC1Q9NRG0 131 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 COPG1Q9Y678 874 aaKnown RBP13.32□□□□□ -0.28
COL2A1-201ENST00000337299 TEX264Q9Y6I9 313 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PRR23D1E9PI22 279 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-201ENST00000337299 DENRO43583 198 aaKnown RBP13.32□□□□□ -0.28
COL2A1-201ENST00000337299 ZBTB14O43829 449 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PGLSO95336 258 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PRR23D2P0DMB1 279 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-201ENST00000337299 SLC2A4P14672 509 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 ACADVLP49748 655 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 SULT2A1Q06520 285 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 SLC13A2Q13183 592 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PTGR2Q8N8N7 351 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-201ENST00000337299 BSNDQ8WZ55 320 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 HGH1Q9BTY7 390 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PKP3Q9Y446 797 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 TRAF6Q9Y4K3 522 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 FMN2Q9NZ56 1722 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PIPSLA2A3N6 862 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 TSPAN4O14817 238 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 UGT2B4P06133 528 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 BMXP51813 675 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PGGT1BP53609 377 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 DGKKQ5KSL6 1271 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 MBLAC2Q68D91 279 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 P2RY11Q96G91 374 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 POPDC2Q9HBU9 364 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 PDE10AQ9Y233 779 aa13.32□□□□□ -0.28
COL2A1-201ENST00000337299 NDUFS2O75306 463 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 SYT16Q17RD7 645 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 TRIQKQ629K1 86 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms