RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ZNF567Q8N184 647 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 STAG3L4Q8TBR4 150 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PGM2Q96G03 612 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 MED8Q96G25 268 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 COPS8Q99627 209 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SIKE1Q9BRV8 207 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 COPS7BQ9H9Q2 264 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 IGSF9Q9P2J2 1179 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CORO1CQ9ULV4 474 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 GABRDO14764 452 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 KIAA0355O15063 1070 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CA3P07451 260 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SH3PXD2AQ5TCZ1 1133 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 FBXL22Q6P050 247 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM171BQ6P995 826 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ELMO1Q92556 727 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 HDAC10Q969S8 669 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 AHCYL2Q96HN2 611 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PPP1R36Q96LQ0 422 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 YIPF2Q9BWQ6 316 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 NKX2-4Q9H2Z4 354 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PAK6Q9NQU5 681 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PHPT1Q9NRX4 125 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 LOC285556D6RIA3 1793 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 MEIS3P2A8K0S8 358 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ALOX15BO15296 676 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 NBNO60934 754 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 DGKIO75912 1065 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ITGB6P18564 788 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CSKP41240 450 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ATXN1P54253 815 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 MGAT3Q09327 533 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CRYMQ14894 314 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 RTP2Q5QGT7 225 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PRCCQ92733 491 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 FEM1CQ96JP0 617 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CCT8L2Q96SF2 557 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CFHR5Q9BXR6 569 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 MARCOQ9UEW3 520 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ANGPTL2Q9UKU9 493 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ACTL7BQ9Y614 415 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TDRD15B5MCY1 1934 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 RNASEH2AO75792 299 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SLC25A14O95258 325 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 KRT6AP02538 564 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 KRT6BP04259 564 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM153BP0C7A2 387 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SPAM1P38567 509 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 KRT6CP48668 564 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PEX5P50542 639 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ALDH18A1P54886 795 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CRADDP78560 199 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM153CQ494X1 144 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SGO1Q5FBB7 561 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 HFE2Q6ZVN8 426 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SYTL1Q8IYJ3 562 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 KCNN1Q92952 543 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CCDC3Q9BQI4 270 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ACTR8Q9H981 624 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 GID8Q9NWU2 228 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SYBUQ9NX95 663 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ADA2Q9NZK5 511 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 GGA2Q9UJY4 613 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SNX10Q9Y5X0 201 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 BTN3A1O00481 513 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 USP1O94782 785 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 MC4RP32245 332 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 RPS24P62847 133 aaKnown RBP9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 SPDYE7PQ495Y7 208 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 MS4A13Q5J8X5 152 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 UNC5AQ6ZN44 842 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 PHC3Q8NDX5 983 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 TEKT5Q96M29 485 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 EVLQ9UI08 416 aaPredicted RBP9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 LZTS1Q9Y250 596 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 TXNDC9O14530 226 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 ATG13O75143 517 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 ZNF844Q08AG5 666 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 BMPR2Q13873 1038 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 LRRC32Q14392 662 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 LINGO4Q6UY18 593 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 TNIP2Q8NFZ5 429 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 OR6K2Q8NGY2 324 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 SLC2A13Q96QE2 648 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 TMEM248Q9NWD8 314 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM237BA0A1B0GVD1 139 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 LEFTY2O00292 366 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 HCRTO43612 131 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 GSCP56915 257 aaPredicted RBP9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 C21orf59P57076 290 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 DSC3Q14574 896 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 N4BP2L1Q5TBK1 243 aaPredicted RBP9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 HIBCHQ6NVY1 386 aaPredicted RBP9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 RHBDF2Q6PJF5 856 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 ALKAL1Q6UXT8 129 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 ELOVL6Q9H5J4 265 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 ACSS3Q9H6R3 686 aa9.37□□□□□ -0.91
FNDC3B-201ENST00000336824 GKN1Q9NS71 199 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms