RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 PGGT1BP53609 377 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 CDH4P55283 916 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 GNA12Q03113 381 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 BTG3Q14201 252 aaPredicted RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 CNSTQ6PJW8 725 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 EPGNQ6UW88 154 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 DEFB128Q7Z7B8 93 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 RNF168Q8IYW5 571 aaPredicted RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 TSPAN17Q96FV3 270 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 IGSF21Q96ID5 467 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 GPR78Q96P69 363 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 OMDQ99983 421 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 PPP1R12CQ9BZL4 782 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 MRPL46Q9H2W6 279 aaKnown RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 MFSD1Q9H3U5 465 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 COG4Q9H9E3 785 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 ZFP37Q9Y6Q3 630 aaPredicted RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 MAGEC1O60732 1142 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 GJB5O95377 273 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 EPOP01588 193 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 GM2AP17900 193 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 PRAMEP78395 509 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 ILF2Q12905 390 aaKnown RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 USP4Q13107 963 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 ANKRD33Q7Z3H0 272 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 CILP2Q8IUL8 1156 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 RBM15BQ8NDT2 890 aaKnown RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 MRPL57Q9BQC6 102 aaKnown RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 VN1R3Q9BXE9 311 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 C1orf21Q9H246 121 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 CWH43Q9H720 699 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 HSFX1Q9UBD0 423 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 STOML1Q9UBI4 398 aa16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 NKX1-2Q9UD57 310 aaPredicted RBP16.8■□□□□ 0.28
TMEM39B-201ENST00000336294 MUSKO15146 869 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 COCHO43405 550 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 MYCP01106 439 aaPredicted RBP16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 SERPINF2P08697 491 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 HOXD9P28356 352 aaPredicted RBP16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 ATN1P54259 1190 aaPredicted RBP16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 MXRA7P84157 204 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 DLG1Q12959 904 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 PRKAA1Q13131 559 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 TAF11Q15544 211 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 FSCBQ5H9T9 825 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 RBM20Q5T481 1227 aaKnown RBP16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 VWA5B1Q5TIE3 1220 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 IL31Q6EBC2 164 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 ALG1LQ6GMV1 187 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 DENND1CQ8IV53 801 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 OR6P1Q8NGX9 317 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 TTC8Q8TAM2 541 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 PEX13Q92968 403 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 MIEF2Q96C03 454 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 TRPM5Q9NZQ8 1165 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 SEPT3Q9UH03 358 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
TMEM39B-201ENST00000336294 A0A0D9SEW6 157 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 AURKAO14965 403 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 LDB2O43679 373 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 DLX3O60479 287 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 ENTPD5O75356 428 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 CLDN11O75508 207 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 HMGA1P17096 107 aaKnown RBP16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 RPL14P50914 215 aaKnown RBP16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 RAP1GDS1P52306 607 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 NAGLUP54802 743 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 OXCT1P55809 520 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 NAA25Q14CX7 972 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 SLC14A2Q15849 920 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 FAM83EQ2M2I3 478 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 METTL21CQ5VZV1 264 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 TMC7Q7Z402 723 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 PTAR1Q7Z6K3 402 aaPredicted RBP16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 HEXDCQ8WVB3 486 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 SCG3Q8WXD2 468 aaKnown RBP16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 HDAC10Q969S8 669 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 NAF1Q96HR8 494 aaKnown RBP16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 NDNQ99608 321 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 MGME1Q9BQP7 344 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 CLSTN3Q9BQT9 956 aa16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 UBA2Q9UBT2 640 aaPredicted RBP16.78■□□□□ 0.28
TMEM39B-201ENST00000336294 SLCO1B7G3V0H7 640 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 H3BNC9 293 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 PIGNO95427 931 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 SEC24AO95486 1093 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 CHRNGP07510 517 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 NCF2P19878 526 aaPredicted RBP16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 MPSTP25325 297 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 ACVR1Q04771 509 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 IKBKEQ14164 716 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF789Q5FWF6 425 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 ARL13AQ5H913 290 aaPredicted RBP16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 HECTD2Q5U5R9 776 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 AGAP9Q5VTM2 703 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 TPGS2Q68CL5 300 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 KLC3Q6P597 504 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 OR7D4Q8NG98 312 aa16.77■□□□□ 0.28
TMEM39B-201ENST00000336294 ZNF461Q8TAF7 563 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms