RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TIMP2P16035 220 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 OXTRP30559 389 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 GEMP55040 296 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 CCDC15Q0P6D6 951 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 SLC14A2Q15849 920 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 MAP7D1Q3KQU3 841 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 USP39Q53GS9 565 aaKnown RBP14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 BRAT1Q6PJG6 821 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 KDELC1Q6UW63 502 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 ZNF572Q7Z3I7 529 aaPredicted RBP14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 TTC7BQ86TV6 843 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 FAM160A2Q8N612 972 aaPredicted RBP14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 FRMD1Q8N878 549 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 RUNDC3BQ96NL0 473 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 PPP1R2P1Q96PQ5 205 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 KRT12Q99456 494 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 MLPHQ9BV36 600 aaPredicted RBP14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 TDRD1Q9BXT4 1180 aaKnown RBP14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 FAM126AQ9BYI3 521 aaPredicted RBP14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 PCDH9Q9HC56 1237 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 VPS45Q9NRW7 570 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 PCYOX1Q9UHG3 505 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 FZD4Q9ULV1 537 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 AAR2Q9Y312 384 aaKnown RBP14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 IGHV1OR15-9A0A0B4J2B8 117 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 SLC7A4O43246 635 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 FZD6O60353 706 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 GAS8O95995 478 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 IGLV3-19P01714 112 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 PDHA1P08559 390 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 XPAP23025 273 aaPredicted RBP14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 FDFT1P37268 417 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 ABL2P42684 1182 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 PTGIRP43119 386 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 VPS41P49754 854 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 WNT3AP56704 352 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 POLR2LP62875 67 aaKnown RBP14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 MPP3Q13368 585 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 PPP1R7Q15435 360 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 LRRC73Q5JTD7 316 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 PIP5KL1Q5T9C9 394 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 AGBL4Q5VU57 503 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 C4orf22Q6V702 233 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 IPMKQ8NFU5 416 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 NELL1Q92832 810 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 IFT43Q96FT9 208 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 TOE1Q96GM8 510 aaKnown RBP14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 SPACA7Q96KW9 195 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 MRGPRX2Q96LB1 330 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 BTBD1Q9H0C5 482 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 ETNK1Q9HBU6 452 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 RAB6BQ9NRW1 208 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 ZSCAN32Q9NX65 697 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 NEU2Q9Y3R4 380 aa14.19□□□□□ -0.14
APOBEC3B-202ENST00000335760 EML5Q05BV3 1969 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 GOLGA6CA6NDK9 693 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 GOLGA6BA6NDN3 693 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 UPK3BL1B0FP48 263 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 UPK3BL2E5RIL1 263 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 PRLP01236 227 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 PRKCGP05129 697 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 GOLGA6DP0CG33 693 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 ITIH2P19823 946 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 CD6P30203 668 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 ACSL1P33121 698 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 TNNT3P45378 269 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 LMAN1P49257 510 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 EPHB1P54762 984 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 ADPRHP54922 357 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 DR1Q01658 176 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 CDK18Q07002 472 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 GPS1Q13098 491 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 SRSF5Q13243 272 aaKnown RBP14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 GALNT3Q14435 633 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 UGP2Q16851 508 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 SYCP2LQ5T4T6 812 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 MNS1Q8NEH6 495 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 LPCAT1Q8NF37 534 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 OR14C36Q8NHC7 312 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 PIH1D2Q8WWB5 315 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 SLCO2A1Q92959 643 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 FAM131CQ96AQ9 280 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 FEM1CQ96JP0 617 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 PRRX2Q99811 253 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 FICDQ9BVA6 458 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 FSD1LQ9BXM9 530 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 ADGRE3Q9BY15 652 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 SGK2Q9HBY8 427 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 PCDH12Q9NPG4 1184 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 GOLGA6AQ9NYA3 693 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 MBD1Q9UIS9 605 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 PHTF1Q9UMS5 762 aa14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 ARIH1Q9Y4X5 557 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3B-202ENST00000335760 LOC285095A0A1B0GVY8 99 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 E7EVH7 732 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 PSMD3O43242 534 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 MAP3K13O43283 966 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 PLRG1O43660 514 aaKnown RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 NDUFS2O75306 463 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 SEMA4FO95754 770 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms