RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ZNF385DQ9H6B1 395 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 STK39Q9UEW8 545 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 COPG1Q9Y678 874 aaKnown RBP17.84■□□□□ 0.45
LRCH3-201ENST00000334859 TRPC5OSA6NMA1 111 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 TBX18O95935 607 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 CCDC166P0CW27 439 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 ETFBP38117 255 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 THOP1P52888 689 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 PLK1P53350 603 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 NFE2Q16621 373 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-201ENST00000334859 TECRLQ5HYJ1 363 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 AGAP9Q5VTM2 703 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 MSANTD2Q6P1R3 559 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 KLC3Q6P597 504 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 TTC9BQ8N6N2 239 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 NR1H4Q96RI1 486 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-201ENST00000334859 CDRT15Q96T59 188 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 KLHL4Q9C0H6 718 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 SUDS3Q9H7L9 328 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-201ENST00000334859 ARNT2Q9HBZ2 717 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 SLC24A3Q9HC58 644 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 ZBTB26Q9HCK0 441 aa17.84■□□□□ 0.45
LRCH3-201ENST00000334859 PRDM5Q9NQX1 630 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-201ENST00000334859 HMBSP08397 361 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 CCND3P30281 292 aaPredicted RBP17.83■□□□□ 0.45
LRCH3-201ENST00000334859 PKNOX1P55347 436 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 CLLU1OSQ5K130 101 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 RAP1GAP2Q684P5 730 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 OR52E8Q6IFG1 317 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 LDB1Q86U70 411 aaPredicted RBP17.83■□□□□ 0.45
LRCH3-201ENST00000334859 KBTBD6Q86V97 674 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 CIR1Q86X95 450 aaPredicted RBP17.83■□□□□ 0.45
LRCH3-201ENST00000334859 PDSS2Q86YH6 399 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 ARHGAP18Q8N392 663 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 OR13J1Q8NGT2 312 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 PPP2R3CQ969Q6 453 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 VPS45Q9NRW7 570 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 TMEM248Q9NWD8 314 aa17.83■□□□□ 0.45
LRCH3-201ENST00000334859 OAZ2O95190 189 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 LTA4HP09960 611 aaKnown RBP17.83■□□□□ 0.44
LRCH3-201ENST00000334859 ZCCHC18P0CG32 403 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 KCNA5P22460 613 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 DNAJB13P59910 316 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 PRAMEP78395 509 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 PRKCZQ05513 592 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 ART3Q13508 389 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 FLOT2Q14254 428 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 SFT2D3Q587I9 215 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 RPS27LQ71UM5 84 aaKnown RBP17.83■□□□□ 0.44
LRCH3-201ENST00000334859 ZNF683Q8IZ20 524 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 RNF148Q8N7C7 305 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 USP13Q92995 863 aaPredicted RBP17.83■□□□□ 0.44
LRCH3-201ENST00000334859 TSPAN17Q96FV3 270 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 FUBP3Q96I24 572 aaKnown RBP eCLIP17.83■□□□□ 0.44
LRCH3-201ENST00000334859 DDX50Q9BQ39 737 aaKnown RBP17.83■□□□□ 0.44
LRCH3-201ENST00000334859 WDR41Q9HAD4 459 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 ATP13A1Q9HD20 1204 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 UXTQ9UBK9 157 aaPredicted RBP17.83■□□□□ 0.44
LRCH3-201ENST00000334859 DOCK4Q8N1I0 1966 aa17.83■□□□□ 0.44
LRCH3-201ENST00000334859 A8MT66 165 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 H3BNX3 289 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 SDHDO14521 159 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 SOAT2O75908 522 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 LYNP07948 512 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 MSX2P35548 267 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 LEPRP48357 1165 aaKnown RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 AQP4P55087 323 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 INHBEP58166 350 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 SULT2A1Q06520 285 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 GRAMD1BQ3KR37 738 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 SIRPB2Q5JXA9 342 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 MAP3K21Q5TCX8 1036 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 SAPCD2Q86UD0 394 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 CILP2Q8IUL8 1156 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 APLFQ8IW19 511 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 ATAD1Q8NBU5 361 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 STON2Q8WXE9 905 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 C8orf48Q96LL4 319 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 PCDHB5Q9Y5E4 795 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 IPO13O94829 963 aaKnown RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 MMP2P08253 660 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 ADSLP30566 484 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 ARPP19P56211 112 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 DSC1Q08554 894 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 HERC3Q15034 1050 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 TRIM71Q2Q1W2 868 aaKnown RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 C10orf120Q5SQS8 335 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 VARS2Q5ST30 1063 aaKnown RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 HECTD2Q5U5R9 776 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 RNF220Q5VTB9 566 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 ATP6V0D2Q8N8Y2 350 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 IGSF8Q969P0 613 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 FBXO32Q969P5 355 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 HDAC10Q969S8 669 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 CCDC126Q96EE4 140 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 PHF21BQ96EK2 531 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 TMA16Q96EY4 203 aaKnown RBP17.82■□□□□ 0.44
LRCH3-201ENST00000334859 BTN2A3PQ96KV6 586 aa17.82■□□□□ 0.44
LRCH3-201ENST00000334859 RANBP9Q96S59 729 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms