RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 NAPEPLDQ6IQ20 393 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 ERAP2Q6P179 960 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 PEX26Q7Z412 305 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 CCDC13Q8IYE1 715 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 MINDY1Q8N5J2 469 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 MFSD2AQ8NA29 543 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 UBE2Q2Q8WVN8 375 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 MAML1Q92585 1016 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 ANP32BQ92688 251 aaKnown RBP14.15□□□□□ -0.14
LIMS1-201ENST00000332345 SLC6A18Q96N87 628 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 SLC17A9Q9BYT1 436 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 POLR1EQ9GZS1 481 aaKnown RBP14.15□□□□□ -0.14
LIMS1-201ENST00000332345 NT5MQ9NPB1 228 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 FSCN3Q9NQT6 498 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 ZFR2Q9UPR6 939 aaKnown RBP14.15□□□□□ -0.14
LIMS1-201ENST00000332345 PLXNA2O75051 1894 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 TSPAN11A1L157 253 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 GRID2IPA4D2P6 1211 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 AREL1O15033 823 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 DFNA5O60443 496 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 SOCS5O75159 536 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 CER1O95813 267 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 PAK4O96013 591 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-201ENST00000332345 KRT10P13645 584 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 CR2P20023 1033 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 TGM2P21980 687 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 HNRNPA2B1P22626 353 aaKnown RBP14.14□□□□□ -0.15
LIMS1-201ENST00000332345 NFKBIAP25963 317 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 CTNNA2P26232 953 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 ABL2P42684 1182 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 RWDD2BP57060 319 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 PPIDQ08752 370 aaKnown RBP14.14□□□□□ -0.15
LIMS1-201ENST00000332345 AP1B1Q10567 949 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 OVGP1Q12889 678 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 UAP1L1Q3KQV9 507 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 TMEM259Q4ZIN3 620 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 IQCHQ86VS3 1027 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 PGBD5Q8N414 524 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 UBL4BQ8N7F7 174 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 LRRC57Q8N9N7 239 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 FAM174AQ8TBP5 190 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 CXorf40AQ8TE69 158 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 ASB12Q8WXK4 309 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 KRT35Q92764 455 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 P3H4Q92791 437 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 KLK6Q92876 244 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 LGMNQ99538 433 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 NOD2Q9HC29 1040 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 DNAAF2Q9NVR5 837 aaKnown RBP14.14□□□□□ -0.15
LIMS1-201ENST00000332345 EFR3BQ9Y2G0 817 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 HS3ST3A1Q9Y663 406 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 SLCO1B1Q9Y6L6 691 aa14.14□□□□□ -0.15
LIMS1-201ENST00000332345 ASCC3Q8N3C0 2202 aaKnown RBP14.13□□□□□ -0.15
LIMS1-201ENST00000332345 A0A1W2PR77 199 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 IGLON5A6NGN9 336 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 MIF4GDA9UHW6 222 aaKnown RBP14.13□□□□□ -0.15
LIMS1-201ENST00000332345 UPK3BL1B0FP48 263 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 UPK3BL2E5RIL1 263 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 TLR4O00206 839 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 TRAFD1O14545 582 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-201ENST00000332345 JCHAINP01591 159 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 PEX5P50542 639 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 MAXP61244 160 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 SLC14A1Q13336 389 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 PPP2R5EQ16537 467 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 KIF19Q2TAC6 998 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 HLA-BQ31612 363 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 TMEM52BQ4KMG9 183 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 SEL1L3Q68CR1 1132 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 NPNTQ6UXI9 565 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 NT5DC3Q86UY8 548 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 ECHDC3Q96DC8 303 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 LENG8Q96PV6 779 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-201ENST00000332345 SEMA3CQ99985 751 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 C1QTNF7Q9BXJ2 289 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 C1QTNF2Q9BXJ5 285 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 GAREM1Q9H706 876 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 PCDH12Q9NPG4 1184 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 TRIM10Q9UDY6 481 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 GUCA1BQ9UMX6 200 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 PCDHGC4Q9Y5F7 938 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 SNX11Q9Y5W9 270 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 CABIN1Q9Y6J0 2220 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 PCDH15Q96QU1 1955 aa14.13□□□□□ -0.15
LIMS1-201ENST00000332345 DNAH14Q0VDD8 3507 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 hCG_1818297A0A087WSY0 165 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 TTC24A2A3L6 582 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-201ENST00000332345 RIOK3O14730 519 aaKnown RBP14.12□□□□□ -0.15
LIMS1-201ENST00000332345 TM4SF5O14894 197 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 WNT9AO14904 365 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 HTRA2O43464 458 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-201ENST00000332345 MMP20O60882 483 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 GJB3O75712 270 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 TM7SF2O76062 418 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 CCDC175P0C221 793 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 PRLRP16471 622 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 CTSKP43235 329 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 MARCKSL1P49006 195 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 BNC1Q01954 994 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 LLGL1Q15334 1064 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms