RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PRKAA1Q13131 559 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 GPR17Q13304 367 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 SERINC3Q13530 473 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 FUT10Q6P4F1 479 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 KIAA0408Q6ZU52 694 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 DEFB107AQ8IZN7 70 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 SCG3Q8WXD2 468 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 LENG8Q96PV6 779 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 CXorf56Q9H5V9 222 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 OLA1Q9NTK5 396 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 SSX2IPQ9Y2D8 614 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 MTF2Q9Y483 593 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 A0A087X1B8 175 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 DRGXA6NNA5 263 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 MUSKO15146 869 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 BUD23O43709 281 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 ATP6V1C1P21283 382 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 GCKP35557 465 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 PDCD2Q16342 344 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 TSNAXIP1Q2TAA8 658 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 TMEM198Q66K66 360 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 PRSS55Q6UWB4 352 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 MYLK4Q86YV6 388 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 FATE1Q969F0 183 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 HDAC10Q969S8 669 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 SEMA3CQ99985 751 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 MRPL57Q9BQC6 102 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 POMKQ9H5K3 350 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 CYP4F12Q9HCS2 524 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 DONSONQ9NYP3 566 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 ACTL7AQ9Y615 435 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 ARVCFO00192 962 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 ATXN1LP0C7T5 689 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 KCNA5P22460 613 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 DNAJB1P25685 340 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 LEPRP48357 1165 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 PSEN1P49768 467 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 PRKAA2P54646 552 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 LBRQ14739 615 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 TCTN1Q2MV58 587 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 PPM1LQ5SGD2 360 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 METTL21CQ5VZV1 264 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 CILP2Q8IUL8 1156 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 SPPL2BQ8TCT7 592 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 CALML6Q8TD86 181 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 RANBP9Q96S59 729 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 TTC1Q99614 292 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 SUDS3Q9H7L9 328 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 YY1AP1Q9H869 796 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 MARCH4Q9P2E8 410 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 PPM1HQ9ULR3 514 aa14.97□□□□□ -0.01
CLCNKA-201ENST00000331433 MROH6A6NGR9 719 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 INHAP05111 366 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 HNRNPLP14866 589 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 ANPEPP15144 967 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 IL10RBQ08334 325 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 PTPRCAPQ14761 206 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 NXNQ6DKJ4 435 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 TRIM67Q6ZTA4 783 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 RPS27LQ71UM5 84 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 ACTRT2Q8TDY3 377 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 BCL7CQ8WUZ0 217 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 MARK4Q96L34 752 aa14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 MYCBPQ99417 103 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-201ENST00000331433 A0A0D9SEW6 157 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 TRPA1O75762 1119 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 PIRTP0C851 137 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 CCDC166P0CW27 439 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 ATF6P18850 670 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 TACR2P21452 398 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 PIK3R1P27986 724 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 PLK1P53350 603 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 PRAMEP78395 509 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 PARP15Q460N3 678 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 BLOC1S5Q8TDH9 187 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 SH3RF2Q8TEC5 729 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 ANKRD49Q8WVL7 239 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 TADA1Q96BN2 335 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 SPATA17Q96L03 361 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 TSEN34Q9BSV6 310 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 GPAMQ9HCL2 828 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 LRFN2Q9ULH4 789 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 ARL5AQ9Y689 179 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 LOC285095A0A1B0GVY8 99 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 ADAM12O43184 909 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 LDB2O43679 373 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 CCNT2O60583 730 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 PAPSS2O95340 614 aaPredicted RBP14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 BAG2O95816 211 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 COL6A1P12109 1028 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 ACADSP16219 412 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 CLCN5P51795 746 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 NSUN2Q08J23 767 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 NOGQ13253 232 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 GALNT3Q14435 633 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 FAM83EQ2M2I3 478 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 TECRLQ5HYJ1 363 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 TCHHL1Q5QJ38 904 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms