RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CCNJLQ8IV13 435 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 SRRM1Q8IYB3 904 aaKnown RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 CNTD1Q8N815 330 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 CKAP2Q8WWK9 683 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 MRGPRX3Q96LB0 322 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 TTC25Q96NG3 672 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 ASB2Q96Q27 587 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 RPP25Q9BUL9 199 aaKnown RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 MLXIPLQ9NP71 852 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 EURLQ9NYK6 297 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 NKIRAS1Q9NYS0 192 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 TBK1Q9UHD2 729 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 CLEC4EQ9ULY5 219 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 ACTL7BQ9Y614 415 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 MUC22E2RYF6 1773 aaPredicted RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 EDDM13A0A1B0GTR0 161 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
C11orf54-201ENST00000331239 AP2A1O95782 977 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 SRCP12931 536 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 BMP1P13497 986 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 IL9P15248 144 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 GDF10P55107 478 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 SLC10A7Q0GE19 358 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ZBTB17Q13105 803 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 LRRC32Q14392 662 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 KCNJ11Q14654 390 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 TMED2Q15363 201 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 SNCBQ16143 134 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 SLC44A4Q53GD3 710 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 CARD16Q5EG05 197 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 KCTD11Q693B1 232 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ARHGAP36Q6ZRI8 547 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 CYP4X1Q8N118 509 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 NAT8LQ8N9F0 302 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 FEM1CQ96JP0 617 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ZFYVE19Q96K21 471 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 NAT9Q9BTE0 207 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 SAYSD1Q9NPB0 183 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ABCF3Q9NUQ8 709 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 PLK2Q9NYY3 685 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 LHX3Q9UBR4 397 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 EXOC1LA0A1B0GW35 172 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 MAGEB16A2A368 324 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 TBC1D3BA6NDS4 549 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 OTOL1A6NHN0 477 aaPredicted RBP9.59□□□□□ -0.87
C11orf54-201ENST00000331239 FOXO6A8MYZ6 492 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 KCNK1O00180 336 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 CHUKO15111 745 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 INSIG1O15503 277 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 STX2P32856 288 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 CD68P34810 354 aaPredicted RBP9.59□□□□□ -0.87
C11orf54-201ENST00000331239 NPY2RP49146 381 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 GALK1P51570 392 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 STARD6P59095 220 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 RHOAP61586 193 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ILF2Q12905 390 aaKnown RBP9.59□□□□□ -0.87
C11orf54-201ENST00000331239 MPP2Q14168 576 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 C22orf39Q6P5X5 142 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 DSG4Q86SJ6 1040 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 TP53INP2Q8IXH6 220 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 PARP9Q8IXQ6 854 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ATP11CQ8NB49 1132 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 GLIS1Q8NBF1 620 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 TTC16Q8NEE8 873 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 TMIEQ8NEW7 156 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 OR2AP1Q8NGE2 309 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 GDAP1Q8TB36 358 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 ARRDC2Q8TBH0 407 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 PTCD2Q8WV60 388 aaKnown RBP9.59□□□□□ -0.87
C11orf54-201ENST00000331239 PEX13Q92968 403 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 TMEM245Q9H330 911 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 RAB6BQ9NRW1 208 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 GTSE1Q9NYZ3 720 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 DKK3Q9UBP4 350 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 PIAS3Q9Y6X2 628 aa9.59□□□□□ -0.87
C11orf54-201ENST00000331239 HLA-DQB2P05538 268 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 GSTA2P09210 222 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ALADP13716 330 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 HLA-DPA1P20036 260 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 RECQLP46063 649 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 SLC6A11P48066 632 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 CCDC15Q0P6D6 951 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 MLF2Q15773 248 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ZKSCAN8Q15776 578 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 PTPRNQ16849 979 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 GEN1Q17RS7 908 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 HNRNPA1L2Q32P51 320 aaKnown RBP9.58□□□□□ -0.88
C11orf54-201ENST00000331239 SDE2Q6IQ49 451 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 LRRC8BQ6P9F7 803 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 NCEH1Q6PIU2 408 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF852Q6ZMS4 543 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 MAMSTRQ6ZN01 415 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 SPATA21Q7Z572 469 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 C12orf40Q86WS4 652 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 NDUFAF2Q8N183 169 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 CCDC110Q8TBZ0 833 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 FRS2Q8WU20 508 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 ETNK1Q9HBU6 452 aa9.58□□□□□ -0.88
C11orf54-201ENST00000331239 NT5MQ9NPB1 228 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms