RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 GRIK2Q13002 908 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 NR1I3Q14994 352 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 DLG2Q15700 870 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 INAVAQ3KP66 663 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 ALFQ53S48 1182 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 SLC45A4Q5BKX6 768 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 N4BP2L1Q5TBK1 243 aaPredicted RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 PLEKHA7Q6IQ23 1121 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 CAVIN1Q6NZI2 390 aaKnown RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 DNAJC24Q6P3W2 148 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 C14orf80Q86SX3 495 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 CIR1Q86X95 450 aaPredicted RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 MMAAQ8IVH4 418 aaKnown RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 STK40Q8N2I9 435 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 OXR1Q8N573 874 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 ZNF366Q8N895 744 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 OR52K2Q8NGK3 314 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 SLC30A5Q8TAD4 765 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 BAHD1Q8TBE0 780 aaPredicted RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D31Q96DN5 1066 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 PPP1R16AQ96I34 528 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 CDC6Q99741 560 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 C11orf70Q9BRQ4 267 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 HDAC8Q9BY41 377 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 C6orf106Q9H6K1 298 aaPredicted RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 ERVMER34-1Q9H9K5 563 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 TM9SF3Q9HD45 589 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 ANLNQ9NQW6 1124 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 PARVAQ9NVD7 372 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 COX16Q9P0S2 106 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 EIF2B4Q9UI10 523 aaKnown RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 VPS51Q9UID3 782 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 WASF3Q9UPY6 502 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 NEU3Q9UQ49 428 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 EP300Q09472 2414 aaPredicted RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 CBFA2T3O75081 653 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 CNTN5O94779 1100 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 GSRP00390 522 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 PLEKP08567 350 aaPredicted RBP6.45□□□□□ -1.38
SMG1-201ENST00000330588 TNFAIP3P21580 790 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 RFC1P35251 1148 aaPredicted RBP6.45□□□□□ -1.38
SMG1-201ENST00000330588 PBX1P40424 430 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 CTSKP43235 329 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 HCAR3P49019 387 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 STK19P49842 368 aaPredicted RBP6.45□□□□□ -1.38
SMG1-201ENST00000330588 SERPINH1P50454 418 aaKnown RBP6.45□□□□□ -1.38
SMG1-201ENST00000330588 GRM3Q14832 879 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 ASIC2Q16515 512 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 CPSF6Q16630 551 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMG1-201ENST00000330588 PARP15Q460N3 678 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 AGBL4Q5VU57 503 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 SFMBT2Q5VUG0 894 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 NAPEPLDQ6IQ20 393 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 C22orf39Q6P5X5 142 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 NCEH1Q6PIU2 408 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 WDR59Q6PJI9 974 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 SLFN11Q7Z7L1 901 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 FAM131BQ86XD5 332 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 ZCCHC9Q8N567 271 aaKnown RBP6.45□□□□□ -1.38
SMG1-201ENST00000330588 AADATQ8N5Z0 425 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 EMC1Q8N766 993 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 MFSD2AQ8NA29 543 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 OR2A12Q8NGT7 310 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 JOSD2Q8TAC2 188 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 PIP4K2CQ8TBX8 421 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 HCAR2Q8TDS4 363 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 FAM172AQ8WUF8 416 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 RAB7BQ96AH8 199 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 TRIM44Q96DX7 344 aaPredicted RBP6.45□□□□□ -1.38
SMG1-201ENST00000330588 RPL10LQ96L21 214 aaKnown RBP6.45□□□□□ -1.38
SMG1-201ENST00000330588 ISCUQ9H1K1 167 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 NEUROG2Q9H2A3 272 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 LCMT1Q9UIC8 334 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 HPCAL4Q9UM19 191 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 RNF114Q9Y508 228 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 SCINQ9Y6U3 715 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 PI4KAP42356 2102 aa6.45□□□□□ -1.38
SMG1-201ENST00000330588 A0A096LPE4 126 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 LOC100289279A0A1B0GTE1 492 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 A0A1W2PPZ6 126 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 A0A1W2PR77 199 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TTC36A6NLP5 189 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 LRRC53A6NM62 1247 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TEX33O43247 280 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 RTN2O75298 545 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 RNASEH2AO75792 299 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 LRIG2O94898 1065 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 IL1BP01584 269 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 F13BP05160 661 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CDK4P11802 303 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CD38P28907 300 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 GSTT1P30711 240 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CHRNA3P32297 505 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 RECQLP46063 649 aaPredicted RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 PSMD8P48556 350 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CCT8P50990 548 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SUOXP51687 545 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 BNC1Q01954 994 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ZNF252P-AS1Q0IIN9 211 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms