RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 COG8Q96MW5 612 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ADI1Q9BV57 179 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ADAM28Q9UKQ2 775 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 OAZ3Q9UMX2 235 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SCN1AP35498 2009 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SHROOM3Q8TF72 1996 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 RGPD3A6NKT7 1758 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 RGPD4Q7Z3J3 1758 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 TTC36A6NLP5 189 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 NOL3O60936 208 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 PGK1P00558 417 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 NUDT7P0C024 238 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 MTHFD1P11586 935 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 NCK1P16333 377 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ARF4P18085 180 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 KCNA5P22460 613 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 CXCL9Q07325 125 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 NSUN2Q08J23 767 aaKnown RBP eCLIP7.94□□□□□ -1.14
VMA21-201ENST00000330374 NAB1Q13506 487 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 RAB39AQ14964 217 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 NR1D2Q14995 579 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ZBED5Q49AG3 693 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 EGFLAMQ63HQ2 1017 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 UTS2BQ765I0 119 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TMEM110Q86TL2 294 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 PIGZQ86VD9 579 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SNX29P2Q8IUI4 249 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ZC3H7AQ8IWR0 971 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 REPS2Q8NFH8 660 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 BPIFB6Q8NFQ5 453 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 IPMKQ8NFU5 416 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 FZD8Q9H461 694 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TUBGCP4Q9UGJ1 667 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 MID2Q9UJV3 735 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 DSEQ9UL01 958 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 PADI4Q9UM07 663 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ZNF638Q14966 1978 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 FUOMA2VDF0 154 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 AURKAO14965 403 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ERCC2P18074 760 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 PROZP22891 400 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 GABRB3P28472 473 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SLC7A1P30825 629 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 EIF2B2P49770 351 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 CLCN2P51788 898 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 CDH13P55290 713 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 YBX1P67809 324 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 ZBTB17Q13105 803 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SLC12A1Q13621 1099 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 LAMC2Q13753 1193 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 FBXO48Q5FWF7 155 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 NHSL2Q5HYW2 709 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 PERM1Q5SV97 790 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SYPL2Q5VXT5 272 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 NANOGP8Q6NSW7 305 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 KCTD8Q6ZWB6 473 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ZC3HC1Q86WB0 502 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 TMEM126BQ8IUX1 230 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 NIM1KQ8IY84 436 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SIX6OS1Q8N1H7 587 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 CPSF7Q8N684 471 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 SHCBP1Q8NEM2 672 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 HMGCLL1Q8TB92 370 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SLC7A14Q8TBB6 771 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TCF12Q99081 682 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SEPHS2Q99611 448 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 GPATCH1Q9BRR8 931 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 RPF2Q9H7B2 306 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 NCKIPSDQ9NZQ3 722 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SLC2A6Q9UGQ3 507 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TNFSF13BQ9Y275 285 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 DGKBQ9Y6T7 804 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 COL11A2P13942 1736 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 FAM95CA0A1B0GW59 222 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 FAM86C2PA6NEL3 165 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ZBTB42B2RXF5 422 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 INPP4BO15327 924 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 H2AFYO75367 372 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 APBA3O96018 575 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 MT-CYBP00156 380 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 SNRPB2P08579 225 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 PORP16435 677 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 STMN1P16949 149 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 VPS26BQ4G0F5 336 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 GALNT18Q6P9A2 607 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 LYSMD3Q7Z3D4 306 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 PDZD8Q8NEN9 1154 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 HEXDCQ8WVB3 486 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 BIRC8Q96P09 236 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 MLPHQ9BV36 600 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 CXXC1Q9P0U4 656 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 TRPC5Q9UL62 973 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 SQORQ9Y6N5 450 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 CEP350Q5VT06 3117 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 EI24O14681 340 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 AP2A1O95782 977 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 OXTRP30559 389 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TAS2R39P59534 338 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 CYP2A13Q16696 494 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 FAM83EQ2M2I3 478 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms