RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TPBGLP0DKB5 382 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 PTK2BQ14289 1009 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 KIAA0319Q5VV43 1072 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 IZUMO2Q6UXV1 221 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 YTHDF3Q7Z739 585 aaKnown RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 FSTL5Q8N475 847 aaPredicted RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 TRIML2Q8N7C3 387 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 RBM15BQ8NDT2 890 aaKnown RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 MLPHQ9BV36 600 aaPredicted RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 THUMPD3Q9BV44 507 aaKnown RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 PRKD2Q9BZL6 878 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 PHACTR1Q9C0D0 580 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNM-201ENST00000328642 SEMA6AQ9H2E6 1030 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 RHOJQ9H4E5 214 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 DCLRE1BQ9H816 532 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 CFAP97Q9P2B7 532 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 MBLAC1A4D2B0 266 aaPredicted RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 SLC10A3P09131 477 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 THRAP10827 490 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 GKP32189 559 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 MOGSQ13724 837 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 IYDQ6PHW0 289 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 RIPOR1Q6ZS17 1223 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 C11orf96Q7Z7L8 435 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 CDYL2Q8N8U2 506 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 RTL3Q8N8U3 475 aaKnown RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 KCNK4Q9NYG8 393 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 HBS1LQ9Y450 684 aaKnown RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 MATN3O15232 486 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 GJB5O95377 273 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 MARK2Q7KZI7 788 aaKnown RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 IFNLR1Q8IU57 520 aaPredicted RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 METTL6Q8TCB7 284 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 PRR11Q96HE9 360 aaPredicted RBP16.14■□□□□ 0.17
SYNM-201ENST00000328642 THEGQ9P2T0 379 aa16.14■□□□□ 0.17
SYNM-201ENST00000328642 TTC3P53804 2025 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 CD3EAPO15446 510 aaKnown RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 ITGALP20701 1170 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 LRPAP1P30533 357 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 PFKPQ01813 784 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 CBX2Q14781 532 aaPredicted RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 FCRL3Q96P31 734 aaPredicted RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 RBBP8Q99708 897 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 RCOR3Q9P2K3 495 aaPredicted RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 CPQQ9Y646 472 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 COL11A2P13942 1736 aaPredicted RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 OR6C75A6NL08 312 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 ARVCFO00192 962 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 STK25O00506 426 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 PEX1O43933 1283 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 SYN1P17600 705 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 MAP4P27816 1152 aaKnown RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 CRHR1P34998 444 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 BNIP1Q12981 228 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 RALGPS1Q5JS13 557 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 RBM20Q5T481 1227 aaKnown RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 PIM3Q86V86 326 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 ZNF296Q8WUU4 475 aaPredicted RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 RCN3Q96D15 328 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 NPAS2Q99743 824 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 DRC3Q9H069 523 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 TMEM161AQ9NX61 479 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 LTA4HP09960 611 aaKnown RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 CTNNB1P35222 781 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 SLC1A2P43004 574 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 MLLT6P55198 1093 aaPredicted RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 FASTKQ14296 549 aaKnown RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 PPM1LQ5SGD2 360 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 BNC2Q6ZN30 1099 aaPredicted RBP16.13■□□□□ 0.17
SYNM-201ENST00000328642 NPAS4Q8IUM7 802 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 HERC6Q8IVU3 1022 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 SEPHS2Q99611 448 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 TXLNGYQ9BZA5 131 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 PKD2L2Q9NZM6 624 aa16.13■□□□□ 0.17
SYNM-201ENST00000328642 TOMM70O94826 608 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 AHSGP02765 367 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 LINC00032P0C843 101 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 CRABP2P29373 138 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 MC4RP32245 332 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 GNA12Q03113 381 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 ACTR8Q9H981 624 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 TRPC5OSA6NMA1 111 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 KLC1Q07866 573 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 RTP2Q5QGT7 225 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 RINLQ6ZS11 566 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 KYQ8NBH2 561 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 CNBD2Q96M20 576 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 CD84Q9UIB8 345 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 A0A1W2PRU2 124 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 SLC38A8A6NNN8 435 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 CASQ2O14958 399 aaPredicted RBP16.12■□□□□ 0.17
SYNM-201ENST00000328642 LZTS3O60299 673 aaPredicted RBP16.12■□□□□ 0.17
SYNM-201ENST00000328642 SIX3O95343 332 aaPredicted RBP16.12■□□□□ 0.17
SYNM-201ENST00000328642 LIMK2P53671 638 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.12■□□□□ 0.17
SYNM-201ENST00000328642 CAPRIN2Q6IMN6 1127 aaKnown RBP16.12■□□□□ 0.17
SYNM-201ENST00000328642 POTEHQ6S545 545 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 PAQR9Q6ZVX9 377 aa16.12■□□□□ 0.17
SYNM-201ENST00000328642 TDRPQ86YL5 185 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms