RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MARCKSL1P49006 195 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 ATP13A4Q4VNC1 1196 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 TTC7BQ86TV6 843 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 DHFR2Q86XF0 187 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 CD101Q93033 1021 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 LGMNQ99538 433 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 SLC4A5Q9BY07 1137 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 PHPT1Q9NRX4 125 aaPredicted RBP11.49□□□□□ -0.57
COL4A5-201ENST00000328300 CLIC5Q9NZA1 410 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 IGSF9Q9P2J2 1179 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 TLR6Q9Y2C9 796 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 NHSL1Q5SYE7 1610 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 ZSCAN5DPP0CG00 497 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 FLT3P36888 993 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 GNA12Q03113 381 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 ZNF33AQ06730 810 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 PLPP4Q5VZY2 271 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 DIS3LQ8TF46 1054 aaKnown RBP11.49□□□□□ -0.57
COL4A5-201ENST00000328300 SPATA5L1Q9BVQ7 753 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 OSBPL2Q9H1P3 480 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 SYBUQ9NX95 663 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 AP4S1Q9Y587 144 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 ZNF487B1APH4 448 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 CCDC166P0CW27 439 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 ME2P23368 584 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 CYP20A1Q6UW02 462 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 SYT12Q8IV01 421 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 FAM126BQ8IXS8 530 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 DAW1Q8N136 415 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 C8orf48Q96LL4 319 aa11.49□□□□□ -0.57
COL4A5-201ENST00000328300 FAM220BPB1ANY3 271 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SEC24DO94855 1032 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 GUCA1CO95843 209 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ANXA6P08133 673 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 S100A5P33763 92 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ABL2P42684 1182 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 MAGEA11P43364 429 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 CRYMQ14894 314 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 PMF1Q6P1K2 205 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 PTGR2Q8N8N7 351 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SETD9Q8NE22 299 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 PHF21AQ96BD5 680 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 CXorf40BQ96DE9 158 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 AHCYL2Q96HN2 611 aaKnown RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 AGO3Q9H9G7 860 aaKnown RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 INTS7Q9NVH2 962 aaKnown RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 C6orf203Q9P0P8 240 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SFMBT1Q9UHJ3 866 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 VWA7Q9Y334 891 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 TLL2Q9Y6L7 1015 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 POP4O95707 220 aaKnown RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SLC10A3P09131 477 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 CCT8P50990 548 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 NUP107P57740 925 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 IFI35P80217 286 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 PTPRNQ16849 979 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 HLA-DQA1Q5Y7H0 255 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 KLHL4Q9C0H6 718 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 NWD2Q9ULI1 1742 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 INSL6Q9Y581 213 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 BAIAP3O94812 1187 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ELFN1P0C7U0 828 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 OGNP20774 298 aaKnown RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SPAM1P38567 509 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 CPA2P48052 419 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ERFP50548 548 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 DPYSL2Q16555 572 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 TDRPQ86YL5 185 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 KIF2BQ8N4N8 673 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SHCBP1LQ9BZQ2 653 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 APOBEC3GQ9HC16 384 aaKnown RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ARHGEF4Q9NR80 690 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 LEF1Q9UJU2 399 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 PER2O15055 1255 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 KCNH1O95259 989 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 TCN1P20061 433 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ATXN3P54252 364 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 TCEAL1Q15170 157 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 LRRC36Q1X8D7 754 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 TTC33Q6PID6 262 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 PLD3Q8IV08 490 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 GRIN3AQ8TCU5 1115 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 BBIP1A8MTZ0 92 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 RECQL5O94762 991 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 VNN1O95497 513 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SERPINB3P29508 390 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 APLP1P51693 650 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 CYP1B1Q16678 543 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 IL27RAQ6UWB1 636 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ZNF572Q7Z3I7 529 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 ASZ1Q8WWH4 475 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 BBS4Q96RK4 519 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 GOLGA2P5Q9HBQ8 144 aa11.48□□□□□ -0.57
COL4A5-201ENST00000328300 TDRKHQ9Y2W6 561 aaKnown RBP11.48□□□□□ -0.57
COL4A5-201ENST00000328300 SAC3D1A6NKF1 404 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 USP12O75317 370 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 SLC35G4P0C7Q5 338 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ZNF23P17027 643 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms