RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 EZH1Q92800 747 aaPredicted RBP14.83□□□□□ -0.03
TCOF1-201ENST00000323668 HAPLN2Q9GZV7 340 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 IPPQ9Y573 584 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 A0A0J9YYE9 177 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 CCNT2O60583 730 aaKnown RBP14.83□□□□□ -0.04
TCOF1-201ENST00000323668 USP2O75604 605 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-201ENST00000323668 RAB27AP51159 221 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 TNK2Q07912 1038 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 KIAA0408Q6ZU52 694 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 TLR8Q9NR97 1041 aaKnown RBP14.83□□□□□ -0.04
TCOF1-201ENST00000323668 BTRCQ9Y297 605 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 TELO2Q9Y4R8 837 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 ARIH2O95376 493 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 EGFRP00533 1210 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 RHOCP08134 193 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 NEK2P51955 445 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 IL2P60568 153 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 IRF9Q00978 393 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 IL5RAQ01344 420 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 GLT6D1Q7Z4J2 308 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 TAGAPQ8N103 731 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 SFRP1Q8N474 314 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 PCDHB5Q9Y5E4 795 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 PTGES3LE9PB15 166 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 MT-CYBP00156 380 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-201ENST00000323668 AMHP03971 560 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 RPLP2P05387 115 aaKnown RBP14.83□□□□□ -0.04
TCOF1-201ENST00000323668 XRCC1P18887 633 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-201ENST00000323668 BFSP2Q13515 415 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 PCLAFQ15004 111 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 DUSP28Q4G0W2 176 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 MOB2Q70IA6 237 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 DENND6AQ8IWF6 608 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 SEMA3CQ99985 751 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 TIMMDC1Q9NPL8 285 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 MPP6Q9NZW5 540 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 CPA4Q9UI42 421 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 PSAT1Q9Y617 370 aa14.83□□□□□ -0.04
TCOF1-201ENST00000323668 BBIP1A8MTZ0 92 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 PAGE1O75459 146 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 TAF1P21675 1872 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 CCNFP41002 786 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 CCT8P50990 548 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 CRYBB1P53674 252 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 NKAPQ8N5F7 415 aaKnown RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 OR2T34Q8NGX1 318 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 OR2T3Q8NH03 318 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 PIWIL1Q96J94 861 aaKnown RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 PGLYRP2Q96PD5 576 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 CCDC106Q9BWC9 280 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF556Q9HAH1 456 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 VPS45Q9NRW7 570 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 MKS1Q9NXB0 559 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 GALNT8Q9NY28 637 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 A0A1B0GUL6 1792 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 H3BNX3 289 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF682O95780 498 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 FGF3P11487 239 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 CCNCP24863 283 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 YWHAQP27348 245 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 BEX3Q00994 111 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 PRKG2Q13237 762 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 FAM187BQ17R55 369 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 CCDC92Q53HC0 331 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 TTC23Q5W5X9 447 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 DNAJC14Q6Y2X3 702 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 PDSS2Q86YH6 399 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 EID3Q8N140 333 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 CRYBG2Q8N1P7 616 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF276Q8N554 614 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 PCYT2Q99447 389 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 TLE6Q9H808 572 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ACTR8Q9H981 624 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 PARVBQ9HBI1 364 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 TRPV2Q9Y5S1 764 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 SQORQ9Y6N5 450 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ITGB4P16144 1822 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 SMIM35A0A1B0GVV1 85 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 NPHS1O60500 1241 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ENDOD1O94919 500 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 OCM2P0CE71 109 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 OCMP0CE72 109 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 IDO1P14902 403 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ITGALP20701 1170 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 KPNA1P52294 538 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ZIK1Q3SY52 487 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 SLC39A12Q504Y0 691 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ZYG11BQ9C0D3 744 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 UXTQ9UBK9 157 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ATP11BQ9Y2G3 1177 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 TCAF1Q9Y4C2 921 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 BHMG1C9JSJ3 638 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-201ENST00000323668 MSH3P20585 1137 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 EPHX2P34913 555 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 ETV4P43268 484 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 KCTD21Q4G0X4 260 aa14.82□□□□□ -0.04
TCOF1-201ENST00000323668 HECTD2Q5U5R9 776 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms