RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TNFRSF10AO00220 468 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 KLHL18O94889 574 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CDH1P12830 882 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CDC42P60953 191 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 IL18Q14116 193 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 DSTYKQ6XUX3 929 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 HIPK1Q86Z02 1210 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SPAG16Q8N0X2 631 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 EMILIN2Q9BXX0 1053 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 RGS18Q9NS28 235 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ASTN1O14525 1302 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SLC7A2P52569 658 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 OGFOD2Q6N063 350 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SWSAP1Q6NVH7 229 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TMIEQ8NEW7 156 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 AIFM2Q9BRQ8 373 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 RSPH9Q9H1X1 276 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ADAMTS10Q9H324 1103 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF696Q9H7X3 374 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF304Q9HCX3 659 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 RNF225M0QZC1 329 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 MGAT1P26572 445 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 FOXN2P32314 431 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 HADHBP55084 474 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 FAM187BQ17R55 369 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 EARS2Q5JPH6 523 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 RC3H1Q5TC82 1133 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF717Q9BY31 904 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ALG2Q9H553 416 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PXDNQ92626 1479 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 A0A0A0MRY4 1105 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 IRGMA1A4Y4 181 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 UBE2QL1A1L167 161 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TCP10L2B9ZVM9 353 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CYP4B1P13584 511 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 KDELR1P24390 212 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 DNAJB2P25686 324 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PPP3CCP48454 512 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ELP6Q0PNE2 266 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 C2CD6Q53TS8 623 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ARSHQ5FYA8 562 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CNSTQ6PJW8 725 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SPATA13Q96N96 652 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SIK2Q9H0K1 926 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CISHQ9NSE2 258 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 KIAA1257Q9ULG3 409 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 STXBP5LQ9Y2K9 1186 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 NDUFS2O75306 463 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 DHFRP00374 187 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 GSTM5P46439 218 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 BCAT1P54687 386 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 GRAPQ13588 217 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SH3BP5LQ7L8J4 393 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 UNC5BQ8IZJ1 945 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 GRAPLQ8TC17 118 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ATL1Q8WXF7 558 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TBC1D13Q9NVG8 400 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 UBP1Q9NZI7 540 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ABCG2Q9UNQ0 655 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 RIC1Q4ADV7 1423 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SIGLEC16A6NMB1 481 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CENPBD1B2RD01 187 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 H3BSA7 217 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 AIREO43918 545 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 OAS1P00973 400 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 SERPINA1P01009 418 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 IL32P24001 234 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PHKG1Q16816 387 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 FBXO43Q4G163 708 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TMEM214Q6NUQ4 689 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ZBTB46Q86UZ6 589 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 EPHX4Q8IUS5 362 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PCDH20Q8N6Y1 951 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 APOL5Q9BWW9 433 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TJP2Q9UDY2 1190 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF335Q9H4Z2 1342 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PLXNB2O15031 1838 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 H3BN98 237 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 NRP2O60462 931 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 KHDRBS3O75525 346 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SOAT1P35610 550 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PTGIRP43119 386 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 BMT2Q1RMZ1 405 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 FBXO39Q8N4B4 442 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CGRRF1Q99675 332 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 COA1Q9GZY4 146 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 EPB41L4BQ9H329 900 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CAB39LQ9H9S4 337 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SNX15Q9NRS6 342 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 NCF1BA6NI72 391 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 NCF1CA8MVU1 366 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 MTA2O94776 668 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SERPINF2P08697 491 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 NCF1P14598 390 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CSHL1Q14406 222 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SLC22A16Q86VW1 577 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IRF2BP1Q8IU81 584 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 WDR49Q8IV35 697 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms