RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 ANAPC1Q9H1A4 1944 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 A0A087X1B8 175 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 CBX4O00257 560 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 INSIG1O15503 277 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 PHGDHO43175 533 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 HNRNPCL1O60812 293 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 TBL1XO60907 577 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 LRG1P02750 347 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 CNPP09543 421 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 NQO1P15559 274 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 GMPRP36959 345 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 LEPRP48357 1165 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 PRKAA2P54646 552 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 CXorf57Q6NSI4 855 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 CLNKQ7Z7G1 428 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 WDR75Q8IWA0 830 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 GPATCH11Q8N954 259 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 BRSK1Q8TDC3 778 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 SP7Q8TDD2 431 aaPredicted RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 SKA1Q96BD8 255 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 FAM96AQ9H5X1 160 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 TASP1Q9H6P5 420 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 NOD2Q9HC29 1040 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 SCUBE2Q9NQ36 999 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.11■□□□□ 0.33
SSR4-201ENST00000320857 LSM7Q9UK45 103 aaKnown RBP17.11■□□□□ 0.33
SSR4-201ENST00000320857 CPQQ9Y646 472 aa17.11■□□□□ 0.33
SSR4-201ENST00000320857 H0Y626 953 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TGM5O43548 720 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 LDB2O43679 373 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 GJB3O75712 270 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 HAUS5O94927 633 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 CXCL14O95715 111 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 C1RP00736 705 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 ADH1AP07327 375 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 SPATA31D3P0C874 917 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 SLC35E2BP0CK96 405 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 GLDCP23378 1020 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 GABRR2P28476 465 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 NUMBP49757 651 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 RASSF2P50749 326 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 KPNA2P52292 529 aaKnown RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 ABCE1P61221 599 aaKnown RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 ACVR1Q04771 509 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 ITGA9Q13797 1035 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 CYTH1Q15438 398 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TSNAXIP1Q2TAA8 658 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TXNDC8Q6A555 127 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 Q6ZNB5 142 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 SPATA31D4Q6ZUB0 917 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 ASRGL1Q7L266 308 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TBC1D1Q86TI0 1168 aaPredicted RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 ELMOD1Q8N336 334 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 CARNMT1Q8N4J0 409 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 OR6P1Q8NGX9 317 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 BLOC1S5Q8TDH9 187 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 HDAC10Q969S8 669 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TMA16Q96EY4 203 aaKnown RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 TSPAN17Q96FV3 270 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 SCYL1Q96KG9 808 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TRIB3Q96RU7 358 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 RAD9AQ99638 391 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 FBXO6Q9NRD1 293 aaPredicted RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 RUVBL2Q9Y230 463 aaKnown RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 ZNF510Q9Y2H8 683 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 ACTL7AQ9Y615 435 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TMEM114B3SHH9 223 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 G3V2L1 256 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 TRIM13O60858 407 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 LUC7L3O95232 432 aaKnown RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 KITP10721 976 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 CR2P20023 1033 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 SERPINB3P29508 390 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 AVPR1AP37288 418 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 SCNN1BP51168 640 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSR4-201ENST00000320857 GALNT3Q14435 633 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 LILRA6Q6PI73 481 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 ZYG11AQ6WRX3 759 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 PIWIL2Q8TC59 973 aaKnown RBP17.1■□□□□ 0.33
SSR4-201ENST00000320857 STYXQ8WUJ0 223 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 NUDCD1Q96RS6 583 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 SLC22A12Q96S37 553 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 C20orf27Q9GZN8 174 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 DNAJC16Q9Y2G8 782 aa17.1■□□□□ 0.33
SSR4-201ENST00000320857 PLXNA4Q9HCM2 1894 aa17.09■□□□□ 0.33
SSR4-201ENST00000320857 MYLKQ15746 1914 aa17.09■□□□□ 0.33
SSR4-201ENST00000320857 MIA3Q5JRA6 1907 aa17.09■□□□□ 0.33
SSR4-201ENST00000320857 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.09■□□□□ 0.33
SSR4-201ENST00000320857 ITM2AO43736 263 aa17.09■□□□□ 0.33
SSR4-201ENST00000320857 RPP40O75818 363 aaKnown RBP17.09■□□□□ 0.33
SSR4-201ENST00000320857 CRTAMO95727 393 aa17.09■□□□□ 0.33
SSR4-201ENST00000320857 AQP5P55064 265 aa17.09■□□□□ 0.33
SSR4-201ENST00000320857 TAS2R39P59534 338 aa17.09■□□□□ 0.33
SSR4-201ENST00000320857 CNSTQ6PJW8 725 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms