RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PFKPQ01813 784 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 CDK18Q07002 472 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 VPS26BQ4G0F5 336 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 SPESP1Q6UW49 350 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 PIWIL4Q7Z3Z4 852 aaKnown RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 FSTL5Q8N475 847 aaPredicted RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 WDR60Q8WVS4 1066 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 CDH19Q9H159 772 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 VTI1BQ9UEU0 232 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 LGALS13Q9UHV8 139 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 DAB1O75553 588 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 GSNP06396 782 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 ICAM3P32942 547 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 SAMD4BQ5PRF9 694 aaKnown RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 LRRC8BQ6P9F7 803 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 CMASQ8NFW8 434 aaPredicted RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 SLC39A3Q9BRY0 314 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 MGRN1O60291 552 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 LBPP18428 481 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 KLRC2P26717 231 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 L1CAMP32004 1257 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 CRHR1P34998 444 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 FOLH1Q04609 750 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 PPM1LQ5SGD2 360 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 USP50Q70EL3 339 aaPredicted RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 CUZD1Q86UP6 607 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 TP53INP2Q8IXH6 220 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 PSMG2Q969U7 264 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 RIBC2Q9H4K1 309 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 ZDHHC6Q9H6R6 413 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 AP4B1Q9Y6B7 739 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 ZNF7P17097 686 aaPredicted RBP16.58■□□□□ 0.25
CLIP4-201ENST00000320081 BCL2L1Q07817 233 aa16.58■□□□□ 0.25
CLIP4-201ENST00000320081 PPP1R8Q12972 351 aaKnown RBP16.58■□□□□ 0.25
CLIP4-201ENST00000320081 PTP4A2Q12974 167 aa16.58■□□□□ 0.25
CLIP4-201ENST00000320081 CRY1Q16526 586 aa16.58■□□□□ 0.25
CLIP4-201ENST00000320081 HEATR4Q86WZ0 1026 aa16.58■□□□□ 0.25
CLIP4-201ENST00000320081 GMLQ99445 158 aa16.58■□□□□ 0.25
CLIP4-201ENST00000320081 PCYT2Q99447 389 aa16.58■□□□□ 0.25
CLIP4-201ENST00000320081 TRAF6Q9Y4K3 522 aa16.58■□□□□ 0.25
CLIP4-201ENST00000320081 AQP1P29972 269 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 PCYT1AP49585 367 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 TIGD5Q53EQ6 642 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 C6orf52Q5T4I8 152 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 CDHR3Q6ZTQ4 885 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 NAT16Q8N8M0 369 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 GPR156Q8NFN8 814 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 STAG3L4Q8TBR4 150 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 TRMT13Q9NUP7 481 aaKnown RBP16.58■□□□□ 0.24
CLIP4-201ENST00000320081 EFR3BQ9Y2G0 817 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 TDRKHQ9Y2W6 561 aaKnown RBP16.58■□□□□ 0.24
CLIP4-201ENST00000320081 F5P12259 2224 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 BCLAF3A2AJT9 711 aaKnown RBP16.58■□□□□ 0.24
CLIP4-201ENST00000320081 ASGR1P07306 291 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 GSTM1P09488 218 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 ZBTB17Q13105 803 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 ARMC12Q5T9G4 340 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 DHRSXQ8N5I4 330 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 ITFG1Q8TB96 612 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 C10orf82Q8WW14 230 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 SELENOMQ8WWX9 145 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 MCRS1Q96EZ8 462 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 PCDHAC1Q9H158 963 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLIP4-201ENST00000320081 SCN3BQ9NY72 215 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 CYTH4Q9UIA0 394 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 SLC25A13Q9UJS0 675 aa16.58■□□□□ 0.24
CLIP4-201ENST00000320081 NRP1O14786 923 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 CABYRO75952 493 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 SNUPNO95149 360 aaKnown RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 EPHB3P54753 998 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 LSM12Q3MHD2 195 aaKnown RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 DSELQ8IZU8 1212 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 OR56A4Q8NGH8 313 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 SEC14L1Q92503 715 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 SPATA16Q9BXB7 569 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 KIF13AQ9H1H9 1805 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 ZNF284Q2VY69 593 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 NET1Q7Z628 596 aaPredicted RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 TMCO5AQ8N6Q1 288 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 DNAJC1Q96KC8 554 aaKnown RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 OPTCQ9UBM4 332 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 ARL5CA6NH57 179 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 DEPDC1Q5TB30 811 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 ZNF697Q5TEC3 545 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 SCARA3Q6AZY7 606 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 EFL1Q7Z2Z2 1120 aaKnown RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 YAF2Q8IY57 180 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 C2orf73Q8N5S3 287 aaPredicted RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 ZNF398Q8TD17 642 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 APBB2Q92870 758 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 CD101Q93033 1021 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 ZMAT2Q96NC0 199 aaKnown RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 TSSK3Q96PN8 268 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 MYOCQ99972 504 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 MLPHQ9BV36 600 aaPredicted RBP16.57■□□□□ 0.24
CLIP4-201ENST00000320081 SLC7A8Q9UHI5 535 aa16.57■□□□□ 0.24
CLIP4-201ENST00000320081 ZNF189O75820 626 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms