RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ATXN1LP0C7T5 689 aaKnown RBP13.72□□□□□ -0.21
PRPF18-201ENST00000320054 MYBL2P10244 700 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 C7P10643 843 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 GKP32189 559 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 GRIA1P42261 906 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 NPY2RP49146 381 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 ZXDAP98168 799 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 BRD3Q15059 726 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 ARSIQ5FYB1 569 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 SIRPB2Q5JXA9 342 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 EOGTQ5NDL2 527 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 ARMC12Q5T9G4 340 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 ARMC3Q5W041 872 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 GDPD4Q6W3E5 623 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 CAMK1DQ8IU85 385 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 PDIK1LQ8N165 341 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 SIX5Q8N196 739 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 STK40Q8N2I9 435 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 OR52K1Q8NGK4 314 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 FAM129BQ96TA1 746 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 ZDHHC4Q9NPG8 344 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 DKK3Q9UBP4 350 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 PPM1HQ9ULR3 514 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 MMP17Q9ULZ9 603 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 CHKBQ9Y259 395 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 SCN8AQ9UQD0 1980 aa13.72□□□□□ -0.21
PRPF18-201ENST00000320054 UQCRHLA0A096LP55 91 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 CCDC151A5D8V7 595 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 SYNCRIPO60506 623 aaKnown RBP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 ADAM23O75077 832 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 USP12O75317 370 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 LEFTY1O75610 366 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 CTSLP07711 333 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 UQCRHP07919 91 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 ALADP13716 330 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 TARSP26639 723 aaKnown RBP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 WASP42768 502 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 GRIA4P48058 902 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 FZD5Q13467 585 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 STARD3Q14849 445 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 DNAJC21Q5F1R6 531 aaKnown RBP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 FNBP1LQ5T0N5 605 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 EMBQ6PCB8 327 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 BRAT1Q6PJG6 821 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 CENPUQ71F23 418 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 RELL1Q8IUW5 271 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 TXNDC5Q8NBS9 432 aaKnown RBP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 RPLP0P6Q8NHW5 317 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 AENQ8WTP8 325 aaKnown RBP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 LRRC39Q96DD0 335 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 APOL2Q9BQE5 337 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 RSPH9Q9H1X1 276 aaPredicted RBP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 TBC1D17Q9HA65 648 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 PPIL1Q9Y3C6 166 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 PCDHB9Q9Y5E1 797 aa13.71□□□□□ -0.21
PRPF18-201ENST00000320054 ZNF106Q9H2Y7 1883 aaKnown RBP13.71□□□□□ -0.21
PRPF18-201ENST00000320054 LRRK1Q38SD2 2015 aa13.71□□□□□ -0.22
PRPF18-201ENST00000320054 FAM170BA6NMN3 283 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 ANKRD66B4E2M5 251 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 C1QTNF3-AMACRE9PGA6 284 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 RNASEH1O60930 286 aaKnown RBP13.7□□□□□ -0.22
PRPF18-201ENST00000320054 ERLIN1O75477 346 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 CPP00450 1065 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 UGT2B4P06133 528 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 PDHA1P08559 390 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 HOXB2P14652 356 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 CHRNA4P43681 627 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 POLR2LP62875 67 aaKnown RBP13.7□□□□□ -0.22
PRPF18-201ENST00000320054 OLIG2Q13516 323 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 SLMAPQ14BN4 828 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 UBXN2BQ14CS0 331 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 MAP9Q49MG5 647 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 ZNF805Q5CZA5 627 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 FAM46CQ5VWP2 391 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 KDELC2Q7Z4H8 507 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 NDUFAF2Q8N183 169 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 OR2T3Q8NH03 318 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 PIP4K2CQ8TBX8 421 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 GRIN3AQ8TCU5 1115 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 PDCD6IPQ8WUM4 868 aaKnown RBP13.7□□□□□ -0.22
PRPF18-201ENST00000320054 PIH1D2Q8WWB5 315 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 CLDN23Q96B33 292 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 SIGLEC10Q96LC7 697 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 PWWP2AQ96N64 755 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 KLHL32Q96NJ5 620 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 NECAB3Q96P71 396 aaPredicted RBP13.7□□□□□ -0.22
PRPF18-201ENST00000320054 SRPK1Q96SB4 655 aaKnown RBP13.7□□□□□ -0.22
PRPF18-201ENST00000320054 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 BFARQ9NZS9 450 aa13.7□□□□□ -0.22
PRPF18-201ENST00000320054 A0A1W2PQF6 199 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 SDR42E2A6NKP2 422 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 ATG13O75143 517 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 AVILO75366 819 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 ADH1BP00325 375 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 FAM153BP0C7A2 387 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms