RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ADCYAP1R1P41586 468 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 ZNF792Q3KQV3 632 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 NHSL2Q5HYW2 709 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 DCLRE1AQ6PJP8 1040 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 MYO1HQ8N1T3 1032 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 SGF29Q96ES7 293 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 RANBP9Q96S59 729 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 OSMRQ99650 979 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 UNKQ9C0B0 810 aaKnown RBP19.25■□□□□ 0.67
RTN4-201ENST00000317610 KATNBL1Q9H079 304 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 FAM49AQ9H0Q0 323 aaPredicted RBP19.25■□□□□ 0.67
RTN4-201ENST00000317610 ARMC1Q9NVT9 282 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 TRIM64CA6NLI5 447 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 MRASO14807 208 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 ANXA9O76027 345 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 FGFR3P22607 806 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 ATP4BP51164 291 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 ADARP55265 1226 aaKnown RBP19.25■□□□□ 0.67
RTN4-201ENST00000317610 KIAA0930Q6ICG6 404 aaPredicted RBP19.25■□□□□ 0.67
RTN4-201ENST00000317610 LPCAT2Q7L5N7 544 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 CUZD1Q86UP6 607 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 FIBCD1Q8N539 461 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 CELF6Q96J87 481 aaKnown RBP19.25■□□□□ 0.67
RTN4-201ENST00000317610 WDCPQ9H6R7 721 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 CAAP1Q9H8G2 361 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 DNAAF2Q9NVR5 837 aaKnown RBP19.25■□□□□ 0.67
RTN4-201ENST00000317610 CCDC167Q9P0B6 97 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 CROTQ9UKG9 612 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 SLC8A2Q9UPR5 921 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 A8MT66 165 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 IPO13O94829 963 aaKnown RBP19.24■□□□□ 0.67
RTN4-201ENST00000317610 ARSAP15289 507 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 HDCP19113 662 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 CCNCP24863 283 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 ADRA1AP35348 466 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 NDST2P52849 883 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 LPIN1Q14693 890 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 PPP1R3AQ16821 1122 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 BTBD8Q5XKL5 378 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 WSCD1Q658N2 575 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 KRT80Q6KB66 452 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 BHLHA9Q7RTU4 235 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 GPRIN1Q7Z2K8 1008 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 USP33Q8TEY7 942 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 CIB1Q99828 191 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 SMOQ99835 787 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 TKTL2Q9H0I9 626 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 RNF39Q9H2S5 420 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 CRTAC1Q9NQ79 661 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 SLC2A6Q9UGQ3 507 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 RRN3P2A6NIE6 340 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 NRP2O60462 931 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 SRP72O76094 671 aaKnown RBP19.24■□□□□ 0.67
RTN4-201ENST00000317610 MT-CYBP00156 380 aaPredicted RBP19.24■□□□□ 0.67
RTN4-201ENST00000317610 CPB1P15086 417 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 KCNA5P22460 613 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 ACADVLP49748 655 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 ZMIZ2Q8NF64 920 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 GRIN3AQ8TCU5 1115 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 TFAP2CQ92754 450 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 IL12RB2Q99665 862 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 NOL11Q9H8H0 719 aaKnown RBP19.24■□□□□ 0.67
RTN4-201ENST00000317610 CLK4Q9HAZ1 481 aaKnown RBP19.24■□□□□ 0.67
RTN4-201ENST00000317610 GLOD4Q9HC38 313 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 TUBA8Q9NY65 449 aaPredicted RBP19.24■□□□□ 0.67
RTN4-201ENST00000317610 FBXO5Q9UKT4 447 aa19.24■□□□□ 0.67
RTN4-201ENST00000317610 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.23■□□□□ 0.67
RTN4-201ENST00000317610 PLOD2O00469 737 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 PFDN1O60925 122 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 MMP3P08254 477 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 LRPAP1P30533 357 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 EPHX2P34913 555 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 RABGGTBP53611 331 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 FAM83EQ2M2I3 478 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 KCTD21Q4G0X4 260 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 UBXN11Q5T124 520 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 KIAA0408Q6ZU52 694 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 ERMP1Q7Z2K6 904 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 PACRGLQ8N7B6 248 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 IPMKQ8NFU5 416 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 ZNF419Q96HQ0 510 aaPredicted RBP19.23■□□□□ 0.67
RTN4-201ENST00000317610 FICDQ9BVA6 458 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 NEU3Q9UQ49 428 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 FIS1Q9Y3D6 152 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 USP17L7P0C7H9 530 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 PAMP19021 973 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 IREB2P48200 963 aaKnown RBP19.23■□□□□ 0.67
RTN4-201ENST00000317610 SLC12A2P55011 1212 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 CSHL1Q14406 222 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 ZNF470Q6ECI4 717 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 CYP2R1Q6VVX0 501 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 ZBTB49Q6ZSB9 765 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 DHFR2Q86XF0 187 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 MFSD2AQ8NA29 543 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 OR2T34Q8NGX1 318 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 OR2T3Q8NH03 318 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 PPP1R14BQ96C90 147 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 RHOBTB2Q9BYZ6 727 aa19.23■□□□□ 0.67
RTN4-201ENST00000317610 GEMP55040 296 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 PRKCQQ04759 706 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms