RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 C3orf70A6NLC5 250 aaPredicted RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 YKT6O15498 198 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 TNFSF14O43557 240 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 MMP20O60882 483 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 SDC3O75056 442 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 PALMO75781 387 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 PRKCGP05129 697 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 ARRB1P49407 418 aaPredicted RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 GALNT2Q10471 571 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 LBRQ14739 615 aaKnown RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 PAFAH1B3Q15102 231 aaKnown RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 TMCO4Q5TGY1 634 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 TTC7BQ86TV6 843 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 MGME1Q9BQP7 344 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 ZNF670Q9BS34 389 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 PCDH12Q9NPG4 1184 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 MSRB2Q9Y3D2 182 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 TP53BP1Q12888 1972 aaPredicted RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 MAP1BP46821 2468 aaKnown RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 DMXL2Q8TDJ6 3036 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 LAMA5O15230 3695 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 IGF2RP11717 2491 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 SPTY2D1-AS1A0A0U1RR47 76 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 A6NNZ2 444 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 TRIM38O00635 465 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 HTRA2O43464 458 aaPredicted RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 MAGEC1O60732 1142 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 DGKAP23743 735 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 ACADVLP49748 655 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 SUOXP51687 545 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 RAD51Q06609 339 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 AGERQ15109 404 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 PROX2Q3B8N5 592 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 BRAT1Q6PJG6 821 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 NYAP1Q6ZVC0 841 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 TEX26Q8N6G2 289 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 SLC35G2Q8TBE7 412 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 RAPGEF5Q92565 580 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 FUBP1Q96AE4 644 aaKnown RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 CINPQ9BW66 212 aaPredicted RBP14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 CALN1Q9BXU9 219 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 SEPT3Q9UH03 358 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 PCDHB9Q9Y5E1 797 aa14.73□□□□□ -0.05
PPP1CA-201ENST00000312989 LY6G6EA0A0G2JKS1 128 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 AKR1B15C9JRZ8 316 aaPredicted RBP14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 AKR1B10O60218 316 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 PIAS2O75928 621 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 ITGAVP06756 1048 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 NME1P15531 152 aaKnown RBP14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 FECHP22830 423 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 AP1S1P61966 158 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 SEMG2Q02383 582 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 SLC10A2Q12908 348 aaPredicted RBP14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 EIF2B5Q13144 721 aaKnown RBP14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 DNAJC3Q13217 504 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 GRM3Q14832 879 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 WSCD2Q2TBF2 565 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 ANKRD20A8PQ5CZ79 823 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 UNQ6494/PRO21346Q6UXR6 183 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 CNGA4Q8IV77 575 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 EID2Q8N6I1 236 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 FAM174AQ8TBP5 190 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 RFFLQ8WZ73 363 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 MAML1Q92585 1016 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 WRAP53Q9BUR4 548 aaKnown RBP14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 ATP8A1Q9Y2Q0 1164 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 COQ6Q9Y2Z9 468 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 U3KQA8 63 aa14.72□□□□□ -0.05
PPP1CA-201ENST00000312989 MAP3K6O95382 1288 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 LCA5LO95447 670 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 CSF2P04141 144 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 PROS1P07225 676 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 C6P13671 934 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 GJC1P36383 396 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 GARSP41250 739 aaKnown RBP14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 RABIFP47224 123 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 SCNN1BP51168 640 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 GBE1Q04446 702 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 TRAF2Q12933 501 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 KRT81Q14533 505 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 IRF4Q15306 451 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 HADHQ16836 314 aaKnown RBP14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 ZNF542PQ5EBM4 170 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 KCTD16Q68DU8 428 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 ALG1LQ6GMV1 187 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 TMPRSS7Q7RTY8 843 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 PTAR1Q7Z6K3 402 aaPredicted RBP14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 MARCH9Q86YJ5 346 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 PLD5Q8N7P1 536 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 KDF1Q8NAX2 398 aaPredicted RBP14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 LRRN4Q8WUT4 740 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 FATE1Q969F0 183 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 CNDP2Q96KP4 475 aaKnown RBP14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 CCDC42Q96M95 316 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 NUDCD1Q96RS6 583 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 DEF6Q9H4E7 631 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 ATP13A3Q9H7F0 1226 aa14.71□□□□□ -0.06
PPP1CA-201ENST00000312989 NOD2Q9HC29 1040 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms