RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CCDC28BQ9BUN5 200 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 DDX43Q9NXZ2 648 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 PSMD12O00232 456 aaPredicted RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 VPS4BO75351 444 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SEC22BO75396 215 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 OR6B1O95007 311 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 NFICP08651 508 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CYBAP13498 195 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CD151P48509 253 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 ARL4DP49703 201 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 RRP1BQ14684 758 aaKnown RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 FNBP1LQ5T0N5 605 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TIGD7Q6NT04 549 aaPredicted RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 NT5DC3Q86UY8 548 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CPA6Q8N4T0 437 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 ZCCHC9Q8N567 271 aaKnown RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 TMC2Q8TDI7 906 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 NAT14Q8WUY8 206 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 LMAN2LQ9H0V9 348 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 ACTR8Q9H981 624 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 GPRC5CQ9NQ84 441 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PFDN2Q9UHV9 154 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 MARF1Q9Y4F3 1742 aaKnown RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 C15orf38-AP3S2A0A0A6YYH1 394 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TULP2O00295 520 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PIGNO95427 931 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CRABP2P29373 138 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 QPCTQ16769 361 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SPANXN3Q5MJ09 141 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 MORN1Q5T089 497 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 LPCAT4Q643R3 524 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 ABHD15Q6UXT9 468 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PAGE2Q7Z2X7 111 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 ARPINQ7Z6K5 226 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 AMIGO2Q86SJ2 522 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 STOML2Q9UJZ1 356 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 AP4E1Q9UPM8 1137 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 MAGEB16A2A368 324 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 F5H5T6 163 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TRIM38O00635 465 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PSMD10O75832 226 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 LYPLA2O95372 231 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PRLP01236 227 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TAL1P17542 331 aaPredicted RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 TPH1P17752 444 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 RCVRNP35243 200 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PTGS2P35354 604 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SEZ6Q53EL9 994 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 FBXO39Q8N4B4 442 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CLPBQ9H078 707 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 NMRAL1Q9HBL8 299 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 MIEF1Q9NQG6 463 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PCDHA3Q9Y5H8 950 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 LOC110117498-PIK3R3F6TDL0 507 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 KHDRBS3O75525 346 aaKnown RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 SP100P23497 879 aaPredicted RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 CYP2F1P24903 491 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PPP2R1BP30154 601 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 RPS6KA3P51812 740 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PRKCQQ04759 706 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TYSND1Q2T9J0 566 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 LIN54Q6MZP7 749 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 AAGABQ6PD74 315 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CES3Q6UWW8 571 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SPPL2BQ8TCT7 592 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 EEF1AKMT1Q8WVE0 214 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CLEC4DQ8WXI8 215 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 MBOAT7Q96N66 472 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TMEM175Q9BSA9 504 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 KCND1Q9NSA2 647 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SLC9A8Q9Y2E8 581 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 DYRK1BQ9Y463 629 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SALL3Q9BXA9 1300 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TPP1O14773 563 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PSIP1O75475 530 aaKnown RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 SLITRK3O94933 977 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 KCNH1O95259 989 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 TKTP29401 623 aaKnown RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 TOB1P50616 345 aaPredicted RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 CDC42P60953 191 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 PSME3P61289 254 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 XIAPP98170 497 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CAMK2GQ13555 558 aaPredicted RBP8.24□□□□□ -1.09
VPS41-202ENST00000310301 POU6F1Q14863 301 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 AMHR2Q16671 573 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CYP2W1Q8TAV3 490 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SLC4A5Q9BY07 1137 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CEP41Q9BYV8 373 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 OSBPL6Q9BZF3 934 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 SCUBE2Q9NQ36 999 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 VPS45Q9NRW7 570 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CLN6Q9NWW5 311 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 IKZF3Q9UKT9 509 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 CARD8Q9Y2G2 431 aa8.24□□□□□ -1.09
VPS41-202ENST00000310301 STAU1O95793 577 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 JCHAINP01591 159 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 MYBL2P10244 700 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 VDRP11473 427 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ITGB5P18084 799 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms