RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 KCNA10Q16322 511 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RGS9BPQ6ZS82 235 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 KDELC2Q7Z4H8 507 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 KRT77Q7Z794 578 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 MCEMP1Q8IX19 187 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SCUBE3Q8IX30 993 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 LGI2Q8N0V4 545 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SMYD1Q8NB12 490 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 FAM13CQ8NE31 585 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PRCCQ92733 491 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PEX13Q92968 403 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 FKBP10Q96AY3 582 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ATXN7L3BQ96GX2 97 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RBM18Q96H35 190 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TSC22D3Q99576 134 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBL1YQ9BQ87 522 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 HGH1Q9BTY7 390 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 C9orf16Q9BUW7 83 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 IGFLR1Q9H665 355 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SAR1AQ9NR31 198 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 AGPAT5Q9NUQ2 364 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 DUS2Q9NX74 493 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 NFKBIL1Q9UBC1 381 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SPTA1P02549 2419 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM120BA0PK00 339 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC162PA2VCL2 907 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 FAM86B1E9PN63 330 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SOCS5O75159 536 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SIN3BO75182 1162 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SERPINI2O75830 405 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 USP1O94782 785 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 APBB3O95704 486 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 FAM86B2P0C5J1 330 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PCNAP12004 261 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SERPINB1P30740 379 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CASP6P55212 293 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RPL26P61254 145 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RASGEF1BQ0VAM2 473 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 HNRNPDQ14103 355 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ELOAQ14241 798 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 LRRC23Q53EV4 343 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 FAM133BQ5BKY9 247 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SH3D19Q5HYK7 790 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RTL4Q6ZR62 310 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SLC47A2Q86VL8 602 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 GALNT13Q8IUC8 556 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 MICU2Q8IYU8 434 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 FTMTQ8N4E7 242 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SH2D3CQ8N5H7 860 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SLC25A41Q8N5S1 370 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TTC29Q8NA56 475 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 GLB1L3Q8NCI6 653 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 WDR36Q8NI36 951 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 KAT5Q92993 513 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RAD51AP1Q96B01 352 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CCM2Q9BSQ5 444 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RUSC1Q9BVN2 902 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CKLFQ9UBR5 152 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RPL26L1Q9UNX3 145 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ANGPT4Q9Y264 503 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 INVSQ9Y283 1065 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ASF1AQ9Y294 204 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3DA0A087WVF3 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3IA0A087WXS9 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3EA0A087X179 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3KA0A087X1G2 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3FA6NER0 549 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PP2D1A8MPX8 630 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3LB9A6J9 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TREHO43280 583 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 AKAP3O75969 853 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TGDSO95455 350 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 C8GP07360 202 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3HP0C7X1 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 NQO1P15559 274 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF30P17039 623 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 BCAP31P51572 246 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 NRG3P56975 720 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC85BQ15834 202 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 FAXCQ5TGI0 409 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PAPD7Q5XG87 772 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3GQ6DHY5 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3CQ6IPX1 549 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 KCNT2Q6UVM3 1135 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SLC30A10Q6XR72 485 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CCNI2Q6ZMN8 369 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ADGRG6Q86SQ4 1221 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PHF13Q86YI8 300 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM192Q8IY95 271 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D3Q8IZP1 549 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 LINC00471Q8N535 108 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ATG16L2Q8NAA4 619 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 KYQ8NBH2 561 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ELMO1Q92556 727 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PNKPQ96T60 521 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 THTPAQ9BU02 230 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PDGFDQ9GZP0 370 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 THAP2Q9H0W7 228 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SLC32A1Q9H598 525 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 DHX33Q9H6R0 707 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms