RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NAT8LQ8N9F0 302 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 GOLM1Q8NBJ4 401 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 FAM45AQ8TCE6 357 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 NT5C3BQ969T7 300 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 ACSF2Q96CM8 615 aaPredicted RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 RILPQ96NA2 401 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 C1QTNF7Q9BXJ2 289 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SLC39A8Q9C0K1 460 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 NMRAL1Q9HBL8 299 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 HPS4Q9NQG7 708 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TLR9Q9NR96 1032 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 DDX28Q9NUL7 540 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 DTLQ9NZJ0 730 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 VTI1BQ9UEU0 232 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TAF4O00268 1085 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TMCC2O75069 709 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SOAT2O75908 522 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 KLHL2O95198 593 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 NDST3O95803 873 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 IRF1P10914 325 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 LSP1P33241 339 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TTPAP49638 278 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 POU4F1Q01851 419 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MSLNQ13421 630 aaPredicted RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 PDAP1Q13442 181 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 AUHQ13825 339 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 PDGFRLQ15198 375 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 GEN1Q17RS7 908 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 EMC10Q5UCC4 262 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 RAP1GAP2Q684P5 730 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TTC27Q6P3X3 843 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 FRA10AC1Q70Z53 315 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MARK2Q7KZI7 788 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 KCNMB4Q86W47 210 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SLC7A5P1Q8MH63 180 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 CCDC185Q8N715 623 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 DNAJC9Q8WXX5 260 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 CPT1BQ92523 772 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 CERS2Q96G23 380 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 PANX3Q96QZ0 392 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 RANBP9Q96S59 729 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SYNDIG1Q9H7V2 258 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MIOSQ9NXC5 875 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 PKD2L2Q9NZM6 624 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TBX21Q9UL17 535 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SOX13Q9UN79 622 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TMEM114B3SHH9 223 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TRIM49D1C9J1S8 452 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 E7ESA3 106 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MFSD11O43934 449 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 GPC4O75487 556 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 FGF18O76093 207 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 ZNF7P17097 686 aaPredicted RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 VCLP18206 1134 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 OGNP20774 298 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 OGDHQ02218 1023 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 GAD2Q05329 585 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 CDK18Q07002 472 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 STX3Q13277 289 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SERINC3Q13530 473 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 DPYSQ14117 519 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 NR1D2Q14995 579 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 FAM46CQ5VWP2 391 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SCUBE1Q8IWY4 988 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 ATAD1Q8NBU5 361 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 GDAP1Q8TB36 358 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SPOCK2Q92563 424 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SERPINI1Q99574 410 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 R3HDMLQ9H3Y0 253 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TASP1Q9H6P5 420 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 ZDHHC4Q9NPG8 344 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 STMN3Q9NZ72 180 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TEKT2Q9UIF3 430 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 PLA2G4CQ9UP65 541 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 ACOT9Q9Y305 439 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MRPS23Q9Y3D9 190 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 USP15Q9Y4E8 981 aaPredicted RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 HTR3EA5X5Y0 456 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 BOLA2-SMG1P6H3BVE0 249 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 VPS4BO75351 444 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 IL1R2P27930 398 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 GABRR2P28476 465 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 CORO1AP31146 461 aaKnown RBP6.04□□□□□ -1.44
SEC22A-201ENST00000309934 SLC26A3P40879 764 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 MRPL58Q14197 206 aaKnown RBP6.04□□□□□ -1.44
SEC22A-201ENST00000309934 KCNJ11Q14654 390 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 STK11Q15831 433 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 ATP13A4Q4VNC1 1196 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 KIAA0930Q6ICG6 404 aaPredicted RBP6.04□□□□□ -1.44
SEC22A-201ENST00000309934 PKN3Q6P5Z2 889 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 ADGRD1Q6QNK2 874 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 TRMT11Q7Z4G4 463 aaKnown RBP6.04□□□□□ -1.44
SEC22A-201ENST00000309934 NKAPQ8N5F7 415 aaKnown RBP6.04□□□□□ -1.44
SEC22A-201ENST00000309934 TDRD5Q8NAT2 981 aaKnown RBP6.04□□□□□ -1.44
SEC22A-201ENST00000309934 STYXQ8WUJ0 223 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 ZFAND2BQ8WV99 257 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 SLC44A1Q8WWI5 657 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 LRIG1Q96JA1 1093 aa6.04□□□□□ -1.44
SEC22A-201ENST00000309934 MYRFLQ96LU7 910 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms