RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 ZSCAN5CA6NGD5 496 aaPredicted RBP12.32□□□□□ -0.44
TPT1-201ENST00000309246 LMO7DNF2Z398 122 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 INSIG1O15503 277 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 TCEA3O75764 348 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 KRT3P12035 628 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 TIMP2P16035 220 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 GPD1P21695 349 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 EPHB2P29323 1055 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 RFC1P35251 1148 aaPredicted RBP12.32□□□□□ -0.44
TPT1-201ENST00000309246 RPIAP49247 311 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 PDX1P52945 283 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 JAM2P57087 298 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 YPEL5P62699 121 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 PPARDQ03181 441 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 RAD51Q06609 339 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 RTL3Q8N8U3 475 aaKnown RBP12.32□□□□□ -0.44
TPT1-201ENST00000309246 NAT6Q93015 286 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 NTAN1Q96AB6 310 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 HMCESQ96FZ2 354 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 SLC46A1Q96NT5 459 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 CCDC3Q9BQI4 270 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 SELENOOQ9BVL4 669 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 C1QTNF7Q9BXJ2 289 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 DPH1Q9BZG8 443 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 NUP62CLQ9H1M0 184 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 SIRPGQ9P1W8 387 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 LHX3Q9UBR4 397 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 PADI4Q9UM07 663 aa12.32□□□□□ -0.44
TPT1-201ENST00000309246 ARHGEF17Q96PE2 2063 aaPredicted RBP12.31□□□□□ -0.44
TPT1-201ENST00000309246 CDRT15L2A8MXV6 281 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 RASA4BC9J798 803 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 YY2O15391 372 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 CCP110O43303 1012 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 RASA4O43374 803 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 PIGNO95427 931 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 UNGP13051 313 aaPredicted RBP12.31□□□□□ -0.44
TPT1-201ENST00000309246 XPAP23025 273 aaPredicted RBP12.31□□□□□ -0.44
TPT1-201ENST00000309246 NSFP46459 744 aaKnown RBP12.31□□□□□ -0.44
TPT1-201ENST00000309246 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 SPIDRQ14159 915 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 LY6DQ14210 128 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 KRT31Q15323 416 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 EFHC2Q5JST6 749 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 ESRP1Q6NXG1 681 aaKnown RBP12.31□□□□□ -0.44
TPT1-201ENST00000309246 SCYL2Q6P3W7 929 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 WDR59Q6PJI9 974 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 TRIM72Q6ZMU5 477 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 SLFN11Q7Z7L1 901 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 HID1Q8IV36 788 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 KYQ8NBH2 561 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 PCDH19Q8TAB3 1148 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 CASKIN2Q8WXE0 1202 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 TSACCQ96A04 125 aaPredicted RBP12.31□□□□□ -0.44
TPT1-201ENST00000309246 GRAMD1AQ96CP6 724 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 TBATAQ96M53 351 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 NCAPGQ9BPX3 1015 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 SEMA4CQ9C0C4 833 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 ADAM22Q9P0K1 906 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 DKK3Q9UBP4 350 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 GULP1Q9UBP9 304 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 DOLKQ9UPQ8 538 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 PCDHGA8Q9Y5G5 932 aa12.31□□□□□ -0.44
TPT1-201ENST00000309246 CCDC187A0A096LP49 1063 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 CREB3O43889 395 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 TNFSF15O95150 251 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 STAT1P42224 750 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 HK3P52790 923 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 GSCP56915 257 aaPredicted RBP12.3□□□□□ -0.44
TPT1-201ENST00000309246 SKOR1P84550 965 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 ELP6Q0PNE2 266 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 LRRC14Q15048 493 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 CLEC16AQ2KHT3 1053 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 ALG11Q2TAA5 492 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 WSCD2Q2TBF2 565 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 TMEM52BQ4KMG9 183 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 RD3Q7Z3Z2 195 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 FSTL5Q8N475 847 aaPredicted RBP12.3□□□□□ -0.44
TPT1-201ENST00000309246 C3orf20Q8ND61 904 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 WDR36Q8NI36 951 aaKnown RBP12.3□□□□□ -0.44
TPT1-201ENST00000309246 WDR48Q8TAF3 677 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 TTC9Q92623 222 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 CCDC74AQ96AQ1 378 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 SEPT11Q9NVA2 429 aaKnown RBP12.3□□□□□ -0.44
TPT1-201ENST00000309246 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 MFHAS1Q9Y4C4 1052 aa12.3□□□□□ -0.44
TPT1-201ENST00000309246 SIGLEC16A6NMB1 481 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 NTN3O00634 580 aaPredicted RBP12.29□□□□□ -0.44
TPT1-201ENST00000309246 TOR1BO14657 336 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 RASGRP1O95267 797 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 PRKCGP05129 697 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 PCCBP05166 539 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 CALB1P05937 261 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 C6P13671 934 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 CTSEP14091 401 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 BLKP51451 505 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 YBEYP58557 167 aaPredicted RBP12.29□□□□□ -0.44
TPT1-201ENST00000309246 CLN3Q13286 438 aa12.29□□□□□ -0.44
TPT1-201ENST00000309246 SERINC3Q13530 473 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms