RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CSRP2Q16527 193 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 AASDHQ4L235 1098 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SLC45A4Q5BKX6 768 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TRIM61Q5EBN2 209 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 LRRC73Q5JTD7 316 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ARMC12Q5T9G4 340 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ADAT2Q7Z6V5 191 aaKnown RBP11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 NDUFAF2Q8N183 169 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 DCLK2Q8N568 766 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ACTL9Q8TC94 416 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 DNASE2BQ8WZ79 361 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 CEP41Q9BYV8 373 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 CARD9Q9H257 536 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 NOD2Q9HC29 1040 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SEMA4GQ9NTN9 838 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 KLHL8Q9P2G9 620 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 FADS3Q9Y5Q0 445 aa11.1□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PCDH15Q96QU1 1955 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 A0A1W2PQU0 124 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TTC24A2A3L6 582 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 BCAT2O15382 392 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 GJB3O75712 270 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 IGHV4-34P06331 123 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ZNF806P0C7X5 589 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 RBP3P10745 1247 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PTPN3P26045 913 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 EPHB1P54762 984 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TAS2R38P59533 333 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 UGP2Q16851 508 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TEX44Q53QW1 395 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PLA2G2CQ5R387 149 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PEAR1Q5VY43 1037 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ALG1LQ6GMV1 187 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 DARS2Q6PI48 645 aaKnown RBP11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PRR23CQ6ZRP0 262 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 B4GALNT4Q76KP1 1039 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HORMAD1Q86X24 394 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 REXO1L1PQ8IX06 675 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 MAIP1Q8WWC4 291 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HTR3CQ8WXA8 447 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SKA1Q96BD8 255 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 FEM1CQ96JP0 617 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 AGAP3Q96P47 875 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 VAT1Q99536 393 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 IL12RB2Q99665 862 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HERPUD2Q9BSE4 406 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 C1QTNF7Q9BXJ2 289 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 DMTF1Q9Y222 760 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ITM2BQ9Y287 266 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ATP8A1Q9Y2Q0 1164 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 JRKLQ9Y4A0 524 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TRAFD1O14545 582 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 HTRA2O43464 458 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SYPP08247 313 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CYP2A6P11509 494 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TIMP2P16035 220 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 AKT2P31751 481 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CD86P42081 329 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 AFF3P51826 1226 aaKnown RBP11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ATXN3P54252 364 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FAM193AP78312 1265 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TRAF2Q12933 501 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SGCGQ13326 291 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ITPRIPL1Q6GPH6 555 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NAPEPLDQ6IQ20 393 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC23A3Q6PIS1 610 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 USP45Q70EL2 814 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KIAA2013Q8IYS2 634 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC35F6Q8N357 371 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KLK6Q92876 244 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ECHDC3Q96DC8 303 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FAM118BQ9BPY3 351 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SMOC1Q9H4F8 434 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TM9SF3Q9HD45 589 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PARD6AQ9NPB6 346 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PCDH12Q9NPG4 1184 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TMEM74BQ9NUR3 256 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PYCARDQ9ULZ3 195 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PHTF1Q9UMS5 762 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC6A14Q9UN76 642 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PCDHB9Q9Y5E1 797 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RAI2Q9Y5P3 530 aa11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PRAMEF26H0Y7S4 382 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ENC1O14682 589 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC31A1O15431 190 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KCNN4O15554 427 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LATO43561 262 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CEP104O60308 925 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TM7SF2O76062 418 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PGLSO95336 258 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ELFN1P0C7U0 828 aa11.07□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 HNRNPA2B1P22626 353 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms