RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 YME1L1Q96TA2 773 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 SORT1Q99523 831 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 TASP1Q9H6P5 420 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 DNAJC28Q9NX36 388 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 DNAJC16Q9Y2G8 782 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 OBSL1O75147 1896 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 FCHO1O14526 889 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 TEX28O15482 410 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 INSIG1O15503 277 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 ITM2AO43736 263 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 SNUPNO95149 360 aaKnown RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 KLHL2O95198 593 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 MYL4P12829 197 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 RAG1P15918 1043 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 PFKLP17858 780 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 ITGB8P26012 769 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 TARSP26639 723 aaKnown RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 PTPN4P29074 926 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 ASPHQ12797 758 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 HSF5Q4G112 596 aaPredicted RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 RALGPS1Q5JS13 557 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 CXorf57Q6NSI4 855 aaKnown RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 FAM117BQ6P1L5 589 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 Q6ZNB5 142 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 CILP2Q8IUL8 1156 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 CENPLQ8N0S6 344 aaPredicted RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 TMEM151AQ8N4L1 468 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 SLC7A6OSQ96CW6 309 aaPredicted RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 NSL1Q96IY1 281 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 PAWRQ96IZ0 340 aaKnown RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 ELMO2Q96JJ3 720 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 NUDCD1Q96RS6 583 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 SPON2Q9BUD6 331 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 TLE6Q9H808 572 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 ZNF395Q9H8N7 513 aaPredicted RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 HAO1Q9UJM8 370 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 TARM1B6A8C7 271 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 PHGDHO43175 533 aaKnown RBP19.55■□□□□ 0.72
HOXC4-201ENST00000303406 GREM1O60565 184 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 CALB2P22676 271 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 SLC26A3P40879 764 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 SGSHP51688 502 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 SLC12A2P55011 1212 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 TAS2R39P59534 338 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 PRAMEP78395 509 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 CYTH1Q15438 398 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 LIPMQ5VYY2 423 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 LRRC8EQ6NSJ5 796 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 MFSD6LQ8IWD5 586 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 PTCD3Q96EY7 689 aaKnown RBP19.55■□□□□ 0.72
HOXC4-201ENST00000303406 GPR78Q96P69 363 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 ZNF334Q9HCZ1 680 aaPredicted RBP19.55■□□□□ 0.72
HOXC4-201ENST00000303406 IL23AQ9NPF7 189 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 RPL26L1Q9UNX3 145 aaKnown RBP19.55■□□□□ 0.72
HOXC4-201ENST00000303406 RUVBL2Q9Y230 463 aaKnown RBP19.55■□□□□ 0.72
HOXC4-201ENST00000303406 ZNF510Q9Y2H8 683 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 NUMBLQ9Y6R0 609 aa19.55■□□□□ 0.72
HOXC4-201ENST00000303406 TYW5A2RUC4 315 aaKnown RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 RPP40O75818 363 aaKnown RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 SERPINA6P08185 405 aa19.54■□□□□ 0.72
HOXC4-201ENST00000303406 F7P08709 466 aaPredicted RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 IRF1P10914 325 aa19.54■□□□□ 0.72
HOXC4-201ENST00000303406 OGNP20774 298 aaKnown RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 HTRA4P83105 476 aaPredicted RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 SMAD3P84022 425 aaKnown RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 INO80DQ53TQ3 878 aaPredicted RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 RNF219Q5W0B1 726 aaPredicted RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 TMCO2Q7Z6W1 182 aaPredicted RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 MAGEC3Q8TD91 643 aa19.54■□□□□ 0.72
HOXC4-201ENST00000303406 KCTD4Q8WVF5 259 aa19.54■□□□□ 0.72
HOXC4-201ENST00000303406 WBP2Q969T9 261 aa19.54■□□□□ 0.72
HOXC4-201ENST00000303406 OMDQ99983 421 aa19.54■□□□□ 0.72
HOXC4-201ENST00000303406 FBXO6Q9NRD1 293 aaPredicted RBP19.54■□□□□ 0.72
HOXC4-201ENST00000303406 PTPRSQ13332 1948 aa19.54■□□□□ 0.72
HOXC4-201ENST00000303406 TTC24A2A3L6 582 aaPredicted RBP19.53■□□□□ 0.72
HOXC4-201ENST00000303406 LYPLA1O75608 230 aaPredicted RBP19.53■□□□□ 0.72
HOXC4-201ENST00000303406 CBX6O95503 412 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 CRTAMO95727 393 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 KRT16P08779 473 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 SBK3P0C264 359 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 GMPRP36959 345 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 SLC7A9P82251 487 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 SNCBQ16143 134 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 CNSTQ6PJW8 725 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 CCDC149Q6ZUS6 474 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 NECAB2Q7Z6G3 386 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 CEP97Q8IW35 865 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 TNS4Q8IZW8 715 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 ADAMTS19Q8TE59 1207 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 HDAC10Q969S8 669 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 MRPL57Q9BQC6 102 aaKnown RBP19.53■□□□□ 0.72
HOXC4-201ENST00000303406 TDRD1Q9BXT4 1180 aaKnown RBP19.53■□□□□ 0.72
HOXC4-201ENST00000303406 MRPL46Q9H2W6 279 aaKnown RBP19.53■□□□□ 0.72
HOXC4-201ENST00000303406 NOD2Q9HC29 1040 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 SCUBE2Q9NQ36 999 aa19.53■□□□□ 0.72
HOXC4-201ENST00000303406 APOBEC2Q9Y235 224 aaKnown RBP19.53■□□□□ 0.72
HOXC4-201ENST00000303406 E2F8A0AVK6 867 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 TSPAN3O60637 253 aa19.52■□□□□ 0.72
HOXC4-201ENST00000303406 ZMPSTE24O75844 475 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms