RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 YBX1P67809 324 aaKnown RBP14.77□□□□□ -0.04
COL6A2-201ENST00000300527 ZNF618Q5T7W0 954 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 ARHGAP17Q68EM7 881 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 ABRAXAS1Q6UWZ7 409 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 CMTR2Q8IYT2 770 aaKnown RBP14.77□□□□□ -0.04
COL6A2-201ENST00000300527 ALDH16A1Q8IZ83 802 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.04
COL6A2-201ENST00000300527 CASP10Q92851 521 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 HDAC10Q969S8 669 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 C18orf25Q96B23 403 aaPredicted RBP14.77□□□□□ -0.04
COL6A2-201ENST00000300527 ZNF385DQ9H6B1 395 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 SETD4Q9NVD3 440 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 GABRB3P28472 473 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 IREB2P48200 963 aaKnown RBP14.77□□□□□ -0.05
COL6A2-201ENST00000300527 RAD23AP54725 363 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 ZBTB17Q13105 803 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 SPIDRQ14159 915 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 BTG3Q14201 252 aaPredicted RBP14.77□□□□□ -0.05
COL6A2-201ENST00000300527 SQLEQ14534 574 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 RFTN1Q14699 578 aaPredicted RBP14.77□□□□□ -0.05
COL6A2-201ENST00000300527 IMPG1Q17R60 797 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 BTLAQ7Z6A9 289 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 TMEM110Q86TL2 294 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 SGCDQ92629 289 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 SPATA33Q96N06 139 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 NEURL2Q9BR09 285 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 CORO1BQ9BR76 489 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 SLC25A23Q9BV35 468 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 MLPHQ9BV36 600 aaPredicted RBP14.77□□□□□ -0.05
COL6A2-201ENST00000300527 RHOJQ9H4E5 214 aa14.77□□□□□ -0.05
COL6A2-201ENST00000300527 RBM47A0AV96 593 aaKnown RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 CCL22O00626 93 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 NFKBIAP25963 317 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 ALDH4A1P30038 563 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 BCAT1P54687 386 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 RAB10P61026 200 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 MBTD1Q05BQ5 628 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 PCSK7Q16549 785 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 PGS1Q32NB8 556 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 GJC2Q5T442 439 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 TSTD2Q5T7W7 516 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 SYPL2Q5VXT5 272 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 RWDD4Q6NW29 188 aaKnown RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 SAMD7Q7Z3H4 446 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 LDB1Q86U70 411 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 TMEM135Q86UB9 458 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 GJD4Q96KN9 370 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 SNX25Q9H3E2 840 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 ZNHIT2Q9UHR6 403 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 VPS51Q9UID3 782 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 SLC27A5Q9Y2P5 690 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 PTPRFP10586 1907 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 TCRBV3S1A0A5B6 114 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 DFFAO00273 331 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 SNX16P57768 344 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 NFATC3Q12968 1075 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 RNF34Q969K3 372 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 CCDC138Q96M89 665 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 IFT80Q9P2H3 777 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 QSER1Q2KHR3 1735 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 TRIM24O15164 1050 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 HUS1O60921 280 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 ARIH2O95376 493 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 ZNF12P17014 697 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 ARF4P18085 180 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 RBM20Q5T481 1227 aaKnown RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 TMEM214Q6NUQ4 689 aaKnown RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 FAM83AQ86UY5 434 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 RETREG3Q86VR2 466 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 GPR22Q99680 433 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 C1QTNF1Q9BXJ1 281 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 EIF2B3Q9NR50 452 aaKnown RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 IPO11Q9UI26 975 aaKnown RBP14.76□□□□□ -0.05
COL6A2-201ENST00000300527 FZD10Q9ULW2 581 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 TNFSF13BQ9Y275 285 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 BTRCQ9Y297 605 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 NME7Q9Y5B8 376 aa14.76□□□□□ -0.05
COL6A2-201ENST00000300527 A0A0J9YYE9 177 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 NME4O00746 187 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 BAIAP3O94812 1187 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 ATICP31939 592 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 ARL1P40616 181 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-201ENST00000300527 MAGEA12P43365 314 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 DNASE1L3Q13609 305 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 EXOC8Q8IYI6 725 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 TMEM151AQ8N4L1 468 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 HERC2P3Q9BVR0 1158 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 SIK2Q9H0K1 926 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 CCDC68Q9H2F9 335 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 FZD8Q9H461 694 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 UTP6Q9NYH9 597 aaKnown RBP14.75□□□□□ -0.05
COL6A2-201ENST00000300527 KLK14Q9P0G3 267 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-201ENST00000300527 ZBTB7AO95365 584 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 PTPRAP18433 802 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 JAK1P23458 1154 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 CXCR3P49682 368 aa14.75□□□□□ -0.05
COL6A2-201ENST00000300527 PPP1R8Q12972 351 aaKnown RBP14.75□□□□□ -0.05
COL6A2-201ENST00000300527 NOMO2Q5JPE7 1267 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms