RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 RFLNAQ6ZTI6 216 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 LINC00523Q86TU6 105 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 UMODL1-AS1Q8N2C9 162 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 CKAP2Q8WWK9 683 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 NXNL1Q96CM4 212 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 MARK4Q96L34 752 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 CCDC68Q9H2F9 335 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 TDP1Q9NUW8 608 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 YBX2Q9Y2T7 364 aaKnown RBP12.7□□□□□ -0.38
TTC17-202ENST00000299240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
TTC17-202ENST00000299240 FAM95CA0A1B0GW59 222 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 NDC80O14777 642 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 OR1I1O60431 355 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 OAS1P00973 400 aaKnown RBP12.7□□□□□ -0.38
TTC17-202ENST00000299240 CDH4P55283 916 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 ARF5P84085 180 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 NR1H3Q13133 447 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 CFAP157Q5JU67 520 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 TEDDM1Q5T9Z0 273 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 SNX30Q5VWJ9 437 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 OTOAQ7RTW8 1153 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 FCRL5Q96RD9 977 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 VAT1Q99536 393 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 MYOCQ99972 504 aa12.7□□□□□ -0.38
TTC17-202ENST00000299240 C1orf232A0A0U1RR37 186 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 HNRNPLP14866 589 aaKnown RBP eCLIP12.69□□□□□ -0.387e-8■■■□□ 18.9
TTC17-202ENST00000299240 NCF2P19878 526 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 TARSP26639 723 aaKnown RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 SOX11P35716 441 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CDH13P55290 713 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 BANPQ8N9N5 519 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 APOPT1Q96IL0 206 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 IL12RB2Q99665 862 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CASS4Q9NQ75 786 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 PSD3Q9NYI0 1048 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 PPARGC1AQ9UBK2 798 aaKnown RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 LOC100653049A0A140TA62 436 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CCDC162PA2VCL2 907 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 KPNA3O00505 521 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 LINC01565O15544 149 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 ITM2AO43736 263 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 PRAMEF11O60813 436 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 SKAP2O75563 359 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 KRT34O76011 436 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 SUN1O94901 812 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 UBOX5O94941 541 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 TRIM16O95361 564 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CBX6O95503 412 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 ASMTLO95671 621 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 GOT2P00505 430 aaKnown RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 TYRP14679 529 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 ARSAP15289 507 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 KPNA1P52294 538 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 NAGLUP54802 743 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CREB5Q02930 508 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 SMARCB1Q12824 385 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CAMK1Q14012 370 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 HABP4Q5JVS0 413 aaKnown RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 FBXW10Q5XX13 1052 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 DENND5AQ6IQ26 1287 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 TTC7BQ86TV6 843 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CEP97Q8IW35 865 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 E2F7Q96AV8 911 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 C1orf74Q96LT6 269 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 GPAMQ9HCL2 828 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 GTSE1Q9NYZ3 720 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 MUC3AQ02505 3323 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 NUMA1Q14980 2115 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 ZDBF2Q9HCK1 2354 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 LUC7L3O95232 432 aaKnown RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 PTPN2P17706 415 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 XPAP23025 273 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 GABRB3P28472 473 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 NDST2P52849 883 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 MXRA7P84157 204 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 PARP15Q460N3 678 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 MTDHQ86UE4 582 aaKnown RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 USP13Q92995 863 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 CCDC97Q96F63 343 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 PRR11Q96HE9 360 aaPredicted RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 HERC2P3Q9BVR0 1158 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 SMG5Q9UPR3 1016 aaKnown RBP12.69□□□□□ -0.38
TTC17-202ENST00000299240 TCAF1Q9Y4C2 921 aa12.69□□□□□ -0.38
TTC17-202ENST00000299240 CCDC166P0CW27 439 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 HLA-FP30511 346 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 HADHAP40939 763 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 RECQLP46063 649 aaPredicted RBP12.68□□□□□ -0.38
TTC17-202ENST00000299240 TRAF2Q12933 501 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 FYB2Q5VWT5 728 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 CXorf57Q6NSI4 855 aaKnown RBP12.68□□□□□ -0.38
TTC17-202ENST00000299240 TSPAN33Q86UF1 283 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 CHST14Q8NCH0 376 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 CFAP61Q8NHU2 1237 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 ALG9Q9H6U8 611 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.68□□□□□ -0.38
TTC17-202ENST00000299240 PACSIN3Q9UKS6 424 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 LAMA1P25391 3075 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 NCOR1O75376 2440 aa12.68□□□□□ -0.38
TTC17-202ENST00000299240 FAM159BA6NKW6 160 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 628.9 ms