RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MAN1A2O60476 641 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 CNOT3O75175 753 aaKnown RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 CHRM3P20309 590 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 NFYCQ13952 458 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 MOGQ16653 247 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 SLC10A6Q3KNW5 377 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 NHSL2Q5HYW2 709 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 OTOP3Q7RTS5 596 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 TTC39CQ8N584 583 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 TBC1D15Q8TC07 691 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 PPP1R10Q96QC0 940 aaKnown RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 SPC25Q9HBM1 224 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 PCDH12Q9NPG4 1184 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 EIF2B3Q9NR50 452 aaKnown RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 IFT80Q9P2H3 777 aaPredicted RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 NDUFAF1Q9Y375 327 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 ZCWPW2A0A1B0GU75 182 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SYCE1LA8MT33 242 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 M0R3G1 203 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 DPYSL4O14531 572 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SLC35E2BP0CK96 405 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 NUMBP49757 651 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CLCN2P51788 898 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 GJA9P57773 515 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 BST2Q10589 180 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PPIL2Q13356 520 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 POLD3Q15054 466 aaPredicted RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 USP41Q3LFD5 358 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 FAM83AQ86UY5 434 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SPATA22Q8NHS9 363 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SPPL2BQ8TCT7 592 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 STYXQ8WUJ0 223 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SLCO4A1Q96BD0 722 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 FAR2Q96K12 515 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PCYT2Q99447 389 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 NSMCE4AQ9NXX6 385 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SMPD3Q9NY59 655 aaPredicted RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 TRAF6Q9Y4K3 522 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 MAGEB16A2A368 324 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SNAP29O95721 258 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 C8BP07358 591 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PFKMP08237 780 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 GSTT2P0CG29 244 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 GSTT2BP0CG30 244 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 HADHAP40939 763 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 RPS9P46781 194 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 NPY2RP49146 381 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 HK2P52789 917 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 BCAT1P54687 386 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 C1QTNF8P60827 252 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 GSTM4Q03013 218 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CD300CQ08708 224 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 TRAP1Q12931 704 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PGS1Q32NB8 556 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 AGAP9Q5VTM2 703 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 TMEM214Q6NUQ4 689 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CCDC80Q76M96 950 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SNX29P2Q8IUI4 249 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 LSMEM2Q8N112 164 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SFRP1Q8N474 314 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 LZTR1Q8N653 840 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PPHLN1Q8NEY8 458 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CENPNQ96H22 339 aaPredicted RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CORO1BQ9BR76 489 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 DNAI2Q9GZS0 605 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 ASB7Q9H672 318 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 DUS2Q9NX74 493 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 TNFSF13BQ9Y275 285 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 COMMD10Q9Y6G5 202 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 GJA3Q9Y6H8 435 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 H0YJX3 145 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PPEF2O14830 753 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CES1P23141 567 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 ELK4P28324 431 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PTPN9P43378 593 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CD151P48509 253 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 DMPKQ09013 629 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 NFATC3Q12968 1075 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 LAMC2Q13753 1193 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 TMTC4Q5T4D3 741 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 ESRP1Q6NXG1 681 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SLC26A9Q7LBE3 791 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 TMEM110Q86TL2 294 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 CEP97Q8IW35 865 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 GLT1D1Q96MS3 346 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 KCTD14Q9BQ13 255 aaPredicted RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 MRPL57Q9BQC6 102 aaKnown RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 NDEL1Q9GZM8 345 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 ALG9Q9H6U8 611 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 PLEKHA5Q9HAU0 1116 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SACM1LQ9NTJ5 587 aa11.48□□□□□ -0.57
TRUB1-201ENST00000298746 ZNF214Q9UL59 606 aaPredicted RBP11.48□□□□□ -0.57
TRUB1-201ENST00000298746 SNAP91O60641 907 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ADAM23O75077 832 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 PAMP19021 973 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 TMEM135Q86UB9 458 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms