RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 B3GALNT2Q8NCR0 500 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 ZNF512Q96ME7 567 aaPredicted RBP19.32■□□□□ 0.68
TRA2A-201ENST00000297071 PGLYRP2Q96PD5 576 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 TBL1YQ9BQ87 522 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 C9orf16Q9BUW7 83 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 OSBPL2Q9H1P3 480 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 SEMA6AQ9H2E6 1030 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 RHBDL2Q9NX52 303 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 GTSE1Q9NYZ3 720 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 SH3GLB1Q9Y371 365 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 NDUFAF1Q9Y375 327 aa19.32■□□□□ 0.68
TRA2A-201ENST00000297071 MIA3Q5JRA6 1907 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 GPC4O75487 556 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 IPO13O94829 963 aaKnown RBP19.31■□□□□ 0.68
TRA2A-201ENST00000297071 FCGR1AP12314 374 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 KCNE1P15382 129 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 TCN1P20061 433 aaPredicted RBP19.31■□□□□ 0.68
TRA2A-201ENST00000297071 CCNCP24863 283 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 TKTP29401 623 aaKnown RBP19.31■□□□□ 0.68
TRA2A-201ENST00000297071 FOXM1Q08050 763 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 LCN8Q6JVE9 175 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 SPRED1Q7Z699 444 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 SIX6OS1Q8N1H7 587 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 NPWQ8N729 165 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 PNPT1Q8TCS8 783 aaKnown RBP19.31■□□□□ 0.68
TRA2A-201ENST00000297071 ASB2Q96Q27 587 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 CIB1Q99828 191 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 TUBA1CQ9BQE3 449 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 TMPRSS4Q9NRS4 437 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 IGSF5Q9NSI5 407 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 TCAF1Q9Y4C2 921 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 NRCAMQ92823 1304 aa19.31■□□□□ 0.68
TRA2A-201ENST00000297071 POLR2AP24928 1970 aaKnown RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 FAM72CH0Y354 149 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 IDO1P14902 403 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 DCKP27707 260 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 AXLP30530 894 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 HOXA11P31270 313 aaPredicted RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 CYP2C18P33260 490 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 HTR7P34969 479 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 TMED1Q13445 227 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 SLC36A3Q495N2 470 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 FAM72AQ5TYM5 149 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 SYPL2Q5VXT5 272 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 PM20D1Q6GTS8 502 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 FAM72DQ6L9T8 149 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 DUS1LQ6P1R4 473 aaKnown RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 LARP4Q71RC2 724 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 FAM72BQ86X60 149 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 MINDY1Q8N5J2 469 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 PPTC7Q8NI37 304 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 HEXDCQ8WVB3 486 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 BORCS5Q969J3 196 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 C18orf25Q96B23 403 aaPredicted RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 MOCOSQ96EN8 888 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 TSPAN17Q96FV3 270 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 NOL11Q9H8H0 719 aaKnown RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 CNGB3Q9NQW8 809 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 ENTPD7Q9NQZ7 604 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 TREX1Q9NSU2 369 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 MAGED2Q9UNF1 606 aaPredicted RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 LTBP3Q9NS15 1303 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 RBM47A0AV96 593 aaKnown RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 USP2O75604 605 aaPredicted RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 FYNP06241 537 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 ZNF12P17014 697 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 SCNN1BP51168 640 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 CLCN5P51795 746 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 GEMP55040 296 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 DAOAP59103 153 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 TAS2R39P59534 338 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 GRSF1Q12849 480 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 KCTD2Q14681 263 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 ATP6AP1Q15904 470 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 ZNF829Q3KNS6 432 aaPredicted RBP19.3■□□□□ 0.68
TRA2A-201ENST00000297071 NOTUMQ6P988 496 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 DCLRE1AQ6PJP8 1040 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 ISLR2Q6UXK2 745 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 CUZD1Q86UP6 607 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 MFSD6LQ8IWD5 586 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 FAM47BQ8NA70 645 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 NETO2Q8NC67 525 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 TSPEARQ8WU66 669 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 L3HYPDHQ96EM0 354 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 AGPAT4Q9NRZ5 378 aa19.3■□□□□ 0.68
TRA2A-201ENST00000297071 TMEM233B4DJY2 109 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 DLGAP1O14490 977 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 HUS1O60921 280 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 CSPG5O95196 566 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 GPIP06744 558 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 HNRNPCP07910 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRA2A-201ENST00000297071 TPH1P17752 444 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 IL10P22301 178 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 LRPAP1P30533 357 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 AVPR1AP37288 418 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 MRPL19P49406 292 aaKnown RBP19.29■□□□□ 0.68
TRA2A-201ENST00000297071 CCNA1P78396 465 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 NFKB2Q00653 900 aa19.29■□□□□ 0.68
TRA2A-201ENST00000297071 NME3Q13232 169 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms