RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RPL38P63173 70 aaKnown RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 PLEKHA7Q6IQ23 1121 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 SVOPQ8N4V2 548 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 SLC39A8Q9C0K1 460 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 PCDHGC5Q9Y5F6 944 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 NCANO14594 1321 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 hCG_1818297A0A087WSY0 165 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 CLOCKO15516 846 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 SHBGP04278 402 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 MARCKSL1P49006 195 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 LRRC49Q8IUZ0 686 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 PRCCQ92733 491 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 LENG1Q96BZ8 264 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 HSD17B14Q9BPX1 270 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 PADI3Q9ULW8 664 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 FGRP09769 529 aa17.39■□□□□ 0.38
SHANK1-201ENST00000293441 CACTIN-AS1Q8N1I8 211 aa17.39■□□□□ 0.38
SHANK1-201ENST00000293441 MYO19Q96H55 970 aa17.39■□□□□ 0.38
SHANK1-201ENST00000293441 POLR1BQ9H9Y6 1135 aa17.39■□□□□ 0.38
SHANK1-201ENST00000293441 ZNF24P17028 368 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 PIK3R1P27986 724 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 C11orf88Q6PI97 169 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 ZDHHC13Q8IUH4 622 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 BHLHE22Q8NFJ8 381 aaPredicted RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 ABCG4Q9H172 646 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 C15orf38-AP3S2A0A0A6YYH1 394 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 SLC28A1O00337 649 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 ATP6V1G2O95670 118 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 TSPAN19P0C672 248 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 TAS2R40P59535 323 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 NEDD8Q15843 81 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 ALG11Q2TAA5 492 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 APTXQ7Z2E3 356 aaKnown RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 ARPINQ7Z6K5 226 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 C12orf50Q8NA57 414 aaPredicted RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 MOSPD2Q8NHP6 518 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 NMD3Q96D46 503 aaKnown RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 MFSD14AQ96MC6 490 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 TSPAN18Q96SJ8 248 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 BCLAF3A2AJT9 711 aaKnown RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 EPHB6O15197 1021 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 CORO1AP31146 461 aaKnown RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 PSMD8P48556 350 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 CDYL2Q8N8U2 506 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 IMP3Q9NV31 184 aaKnown RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 PTSQ03393 145 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 SLC24A5Q71RS6 500 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 RAVER1Q8IY67 606 aaKnown RBP17.39■□□□□ 0.37
SHANK1-201ENST00000293441 SHC3Q92529 594 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 S100A13Q99584 98 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 GULP1Q9UBP9 304 aa17.39■□□□□ 0.37
SHANK1-201ENST00000293441 A0A0U1RQJ8 604 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 PIAS1O75925 651 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 SULT2A1Q06520 285 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 RALGDSQ12967 914 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 BRMS1LQ5PSV4 323 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 CDC73Q6P1J9 531 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 POLNQ7Z5Q5 900 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 TSC22D2O75157 780 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 ATP5F1P24539 256 aaPredicted RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 CDK18Q07002 472 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 SLC25A52Q3SY17 297 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 ALKBH2Q6NS38 261 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 AENQ8WTP8 325 aaKnown RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 C6orf62Q9GZU0 229 aaPredicted RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 ULK1O75385 1050 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 GCNT7Q6ZNI0 430 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 SETD9Q8NE22 299 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 SLC25A12O75746 678 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 NR2F1P10589 423 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 CBX2Q14781 532 aaPredicted RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 INTS11Q5TA45 600 aaKnown RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 SPPL2BQ8TCT7 592 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 SNRNP27Q8WVK2 155 aaKnown RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 SMG7Q92540 1137 aaKnown RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 NELL1Q92832 810 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 ACAT2Q9BWD1 397 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 CHKBQ9Y259 395 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 ERAL1O75616 437 aaKnown RBP17.38■□□□□ 0.37
SHANK1-201ENST00000293441 GSTM5P46439 218 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 MTAPQ13126 283 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 VAV3Q9UKW4 847 aa17.38■□□□□ 0.37
SHANK1-201ENST00000293441 GTPBP1O00178 669 aaKnown RBP17.37■□□□□ 0.37
SHANK1-201ENST00000293441 OPLAHO14841 1288 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 AVILO75366 819 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 GPRIN3Q6ZVF9 776 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 C2orf73Q8N5S3 287 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-201ENST00000293441 ATAD1Q8NBU5 361 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 TSEN2Q8NCE0 465 aaKnown RBP17.37■□□□□ 0.37
SHANK1-201ENST00000293441 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 PTPRJQ12913 1337 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 PDZK1Q5T2W1 519 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 ZNF618Q5T7W0 954 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 C9orf16Q9BUW7 83 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 ARHGEF3Q9NR81 526 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 MKL2Q9ULH7 1088 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 LRATO95237 230 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 LINC00032P0C843 101 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms