RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PPP3CAQ08209 521 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 VAC14Q08AM6 782 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 ATP6AP1LQ52LC2 224 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 EFL1Q7Z2Z2 1120 aaKnown RBP11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 HPS6Q86YV9 775 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 CENPLQ8N0S6 344 aaPredicted RBP11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 ZBTB8BQ8NAP8 495 aaPredicted RBP11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 TIFAQ96CG3 184 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 CCDC126Q96EE4 140 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 GPR63Q9BZJ6 419 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 SYNDIG1Q9H7V2 258 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 EVA1BQ9NVM1 165 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 GJD2Q9UKL4 321 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 TMEM191CA6NGB0 347 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 HS6ST1O60243 411 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 BANF1O75531 89 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 GP5P40197 560 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 C6orf52Q5T4I8 152 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 C6orf183Q5T699 404 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 NAPEPLDQ6IQ20 393 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 MON1AQ86VX9 555 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 FAM131BQ86XD5 332 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 MYO1HQ8N1T3 1032 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 OR5B17Q8NGF7 314 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 ASZ1Q8WWH4 475 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 PPP1R16AQ96I34 528 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 APOL4Q9BPW4 351 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 APOL2Q9BQE5 337 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 RGS18Q9NS28 235 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 MPP6Q9NZW5 540 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 VTI1BQ9UEU0 232 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 SFMBT1Q9UHJ3 866 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.58
NPC1L1-201ENST00000289547 A0A096LPK6 155 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 TSPAN3O60637 253 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 RAMP2O60895 175 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PIGNO95427 931 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 KRT6BP04259 564 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 C8AP07357 584 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 MAGP20916 626 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ADSSP30520 456 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 AKT1P31749 480 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 NOS2P35228 1153 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 KRT6CP48668 564 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PCSK7Q16549 785 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ERAP2Q6P179 960 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ZDHHC13Q8IUH4 622 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ADCY4Q8NFM4 1077 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 S100ZQ8WXG8 99 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 DUSP16Q9BY84 665 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 NUAK2Q9H093 628 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 GOLGA2P5Q9HBQ8 144 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PKP3Q9Y446 797 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 CBX4O00257 560 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ENPP3O14638 875 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 RB1P06400 928 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 C4BPBP20851 252 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 IL12AP29459 219 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ARL4DP49703 201 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 SYTL3Q4VX76 610 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 METTL3Q86U44 580 aaKnown RBP11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 BBS7Q8IWZ6 715 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 C8orf59Q8N0T1 100 aaPredicted RBP11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 DEFB106AQ8N104 65 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 MIER2Q8N344 545 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 HTRA1Q92743 480 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 MECRQ9BV79 373 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 SLC7A5P2Q9GIP4 190 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 CD274Q9NZQ7 290 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 FLRT1Q9NZU1 646 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 CLUHO75153 1309 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 MYADML2A6NDP7 307 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 NDUFS2O75306 463 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 SEMA3DO95025 777 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 LINGO3P0C6S8 592 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 GEMP55040 296 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PWP1Q13610 501 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 GALNTL6Q49A17 601 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 LDLRAP1Q5SW96 308 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 IRF2BP2Q7Z5L9 587 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 RASGEF1CQ8N431 466 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 HJURPQ8NCD3 748 aaPredicted RBP11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ELMO3Q96BJ8 720 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 FOPNLQ96NB1 174 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 SLC25A23Q9BV35 468 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 C1QTNF7Q9BXJ2 289 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 TAS2R1Q9NYW7 299 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 KLHL3Q9UH77 587 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 NDUFAF1Q9Y375 327 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 LOC100506127A0A0U1RQW1 187 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 RGSL1A5PLK6 1076 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 WNT7AO00755 349 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 SPTLC1O15269 473 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 NADKO95544 446 aaPredicted RBP11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 AMPD1P23109 780 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 LRPAP1P30533 357 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms