RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 BATF3Q9NR55 127 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 MAP10Q9P2G4 905 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 ENOPH1Q9UHY7 261 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 EVLQ9UI08 416 aaPredicted RBP18.64■□□□□ 0.57
PCDH1-201ENST00000287008 VWA7Q9Y334 891 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 FFAR3O14843 346 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 GPR42O15529 346 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 RNASEH2AO75792 299 aaKnown RBP18.64■□□□□ 0.57
PCDH1-201ENST00000287008 UQCRBP14927 111 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 ME2P23368 584 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 SCTRP47872 440 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 NOMO1Q15155 1222 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 ZDHHC20Q5W0Z9 365 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 CLYBLQ8N0X4 340 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 OR52K2Q8NGK3 314 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 STK32AQ8WU08 396 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 ING5Q8WYH8 240 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 NDRG1Q92597 394 aaKnown RBP18.64■□□□□ 0.57
PCDH1-201ENST00000287008 TPD52L3Q96J77 140 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 PPP3R2Q96LZ3 170 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 OSBPL6Q9BZF3 934 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 ACSS3Q9H6R3 686 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 NFAT5O94916 1531 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 CCDC189A1A4V9 331 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 STBD1O95210 358 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 NDST3O95803 873 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 ITGA2BP08514 1039 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 ABHD2P08910 425 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 TMEM154Q6P9G4 183 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 FLCNQ8NFG4 579 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 KCTD4Q8WVF5 259 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 FUBP3Q96I24 572 aaKnown RBP eCLIP18.64■□□□□ 0.57
PCDH1-201ENST00000287008 DNAJC1Q96KC8 554 aaKnown RBP18.64■□□□□ 0.57
PCDH1-201ENST00000287008 TMEM237Q96Q45 408 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 IMP3Q9NV31 184 aaKnown RBP18.64■□□□□ 0.57
PCDH1-201ENST00000287008 PCDHGC3Q9UN70 934 aa18.64■□□□□ 0.57
PCDH1-201ENST00000287008 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 LDLRP01130 860 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 RXRGP48443 463 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 FPGSQ05932 587 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 ARL14EPQ8N8R7 260 aaPredicted RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 OR10G6Q8NH81 332 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 ASZ1Q8WWH4 475 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 CLIP3Q96DZ5 547 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 MCCC1Q96RQ3 725 aaPredicted RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 SMAD5Q99717 465 aaKnown RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 C11orf49Q9H6J7 331 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 ZNF232Q9UNY5 417 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 INVSQ9Y283 1065 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 E9PAM4 449 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 PAPSS1O43252 624 aaPredicted RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 OR10H2O60403 315 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 PEX11AO75192 247 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 AVILO75366 819 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 OTCP00480 354 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 RPL3P39023 403 aaKnown RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 GSTA3Q16772 222 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 XKR6Q5GH73 641 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 CYB5D1Q6P9G0 228 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 FAM228AQ86W67 206 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 RNF148Q8N7C7 305 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 NACC2Q96BF6 587 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 UGT2B28Q9BY64 529 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 CLIC5Q9NZA1 410 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 URB1O60287 2271 aaKnown RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 LRCH4O75427 683 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 OR6A2O95222 327 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 NUP107P57740 925 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 ERVK-21P61565 698 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 MRPS35P82673 323 aaKnown RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 GNA12Q03113 381 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 ARHGAP1Q07960 439 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 RGS1Q08116 209 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 C1DQ13901 141 aaKnown RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 AP5B1Q2VPB7 878 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 DUS2Q9NX74 493 aaKnown RBP18.63■□□□□ 0.57
PCDH1-201ENST00000287008 TBC1D30Q9Y2I9 924 aa18.63■□□□□ 0.57
PCDH1-201ENST00000287008 UMPSP11172 480 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 OTUD3Q5T2D3 398 aaPredicted RBP18.62■□□□□ 0.57
PCDH1-201ENST00000287008 PPP2R2DQ66LE6 453 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 BHLHB9Q6PI77 547 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 EID3Q8N140 333 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 CDYL2Q8N8U2 506 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 POMGNT2Q8NAT1 580 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 SLC4A11Q8NBS3 891 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 C2orf15Q8WU43 125 aaKnown RBP18.62■□□□□ 0.57
PCDH1-201ENST00000287008 FERD3LQ96RJ6 166 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 ARHGEF4Q9NR80 690 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 GTF2IRD1Q9UHL9 959 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 Q9Y3F1 56 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 AOC2O75106 756 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 L1CAMP32004 1257 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 PTPN9P43378 593 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 DEFA1P59665 94 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 DEFA3P59666 94 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 CPSF6Q16630 551 aaKnown RBP eCLIP18.62■□□□□ 0.57
PCDH1-201ENST00000287008 TMEM26Q6ZUK4 368 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 ECHDC2Q86YB7 292 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 PHYKPLQ8IUZ5 450 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 ZFP14Q9HCL3 533 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms